Package: GeneNetworkBuilder

Version: 1.22.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/GeneNetworkBuilder_1.22.0.tar.gz && rm -rf GeneNetworkBuilder.buildbin-libdir && mkdir GeneNetworkBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneNetworkBuilder.buildbin-libdir GeneNetworkBuilder_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL GeneNetworkBuilder_1.22.0.zip && rm GeneNetworkBuilder_1.22.0.tar.gz GeneNetworkBuilder_1.22.0.zip

StartedAt: 2018-10-16 19:27:03 -0400 (Tue, 16 Oct 2018)

EndedAt: 2018-10-16 19:28:15 -0400 (Tue, 16 Oct 2018)

EllapsedTime: 72.2 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/GeneNetworkBuilder_1.22.0.tar.gz && rm -rf GeneNetworkBuilder.buildbin-libdir && mkdir GeneNetworkBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneNetworkBuilder.buildbin-libdir GeneNetworkBuilder_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL GeneNetworkBuilder_1.22.0.zip && rm GeneNetworkBuilder_1.22.0.tar.gz GeneNetworkBuilder_1.22.0.zip
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install for i386

* installing *source* package 'GeneNetworkBuilder' ...
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c geneTree.cpp -o geneTree.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nodefilter.cpp -o nodefilter.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o GeneNetworkBuilder.dll tmp.def geneTree.o nodefilter.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/GeneNetworkBuilder.buildbin-libdir/GeneNetworkBuilder/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GeneNetworkBuilder'
    finding HTML links ... done
    GeneNetworkBuilder-package              html  
    browseNetwork-shiny                     html  
    browseNetwork                           html  
    buildNetwork                            html  
    ce.IDsMap                               html  
    ce.interactionmap                       html  
    ce.mapIDs                               html  
    ce.miRNA.map                            html  
    convertID                               html  
    example.data                            html  
    exportNetwork                           html  
    filterNetwork                           html  
    hs.IDsMap                               html  
    hs.interactionmap                       html  
    hs.mapIDs                               html  
    hs.miRNA.map                            html  
    polishNetwork                           html  
    saveXGMML                               html  
    uniqueExprsData                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'GeneNetworkBuilder' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c geneTree.cpp -o geneTree.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.7-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nodefilter.cpp -o nodefilter.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o GeneNetworkBuilder.dll tmp.def geneTree.o nodefilter.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/GeneNetworkBuilder.buildbin-libdir/GeneNetworkBuilder/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneNetworkBuilder' as GeneNetworkBuilder_1.22.0.zip
* DONE (GeneNetworkBuilder)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'GeneNetworkBuilder' successfully unpacked and MD5 sums checked
In R CMD INSTALL