Stephanie M. Gogarten
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/SeqVarTools |
| Branch: RELEASE_3_6 |
| Last Commit: eea11aa |
| Last Changed Date: 2018-03-16 21:12:27 -0400 (Fri, 16 Mar 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:23:09 -0400 (Thu, 12 Apr 2018).
| Package 1282/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SeqVarTools 1.16.1 Stephanie M. Gogarten
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: SeqVarTools |
| Version: 1.16.1 |
| Command: cd SeqVarTools.buildbin-libdir/SeqVarTools && zip -r ../../SeqVarTools_1.16.1.zip . & cd ../.. |
| StartedAt: 2018-04-12 05:03:11 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 05:03:41 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 30.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: SeqVarTools_1.16.1.zip |
| PackageFileSize: 1.573 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd SeqVarTools.buildbin-libdir/SeqVarTools && zip -r ../../SeqVarTools_1.16.1.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (stored 0%) adding: data/Rdata.rds (332 bytes security) (deflated 1%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 42%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 59%) adding: doc/SeqVarTools.pdf (332 bytes security) (deflated 20%) adding: doc/SeqVarTools.R (332 bytes security) (deflated 79%) adding: doc/SeqVarTools.Rnw (332 bytes security) (deflated 62%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/gl_chr1.gds (332 bytes security) (deflated 56%) adding: extdata/gl_chr1.vcf (332 bytes security) (deflated 80%) adding: extdata/hapmap_annotation.txt (332 bytes security) (deflated 63%) adding: extdata/hapmap_annotation_DD.txt (332 bytes security) (deflated 40%) adding: extdata/hapmap_exome_chr22.gds (332 bytes security) (deflated 7%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 83%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: help/SeqVarTools.rdb (332 bytes security) (deflated 1%) adding: help/SeqVarTools.rdx (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 87%) adding: html/allele-methods.html (332 bytes security) (deflated 59%) adding: html/alleleFrequency.html (332 bytes security) (deflated 60%) adding: html/alternateAlleleDetection.html (332 bytes security) (deflated 70%) adding: html/applyMethod.html (332 bytes security) (deflated 64%) adding: html/chromWithPAR.html (332 bytes security) (deflated 51%) adding: html/countSingletons.html (332 bytes security) (deflated 55%) adding: html/duplicateDiscordance.html (332 bytes security) (deflated 70%) adding: html/getGenotype.html (332 bytes security) (deflated 68%) adding: html/getVariableLengthData.html (332 bytes security) (deflated 59%) adding: html/heterozygosity.html (332 bytes security) (deflated 64%) adding: html/hwe.html (332 bytes security) (deflated 60%) adding: html/inbreedCoeff.html (332 bytes security) (deflated 54%) adding: html/isSNV.html (332 bytes security) (deflated 55%) adding: html/isVariant.html (332 bytes security) (deflated 57%) adding: html/Iterator-class.html (332 bytes security) (deflated 73%) adding: html/meanBySample.html (332 bytes security) (deflated 55%) adding: html/mendelErr.html (332 bytes security) (deflated 63%) adding: html/missingGenotypeRate.html (332 bytes security) (deflated 58%) adding: html/pca.html (332 bytes security) (deflated 56%) adding: html/pedigree.html (332 bytes security) (deflated 53%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/refFrac.html (332 bytes security) (deflated 58%) adding: html/regression.html (332 bytes security) (deflated 67%) adding: html/SeqVarData-class.html (332 bytes security) (deflated 70%) adding: html/SeqVarTools-package.html (332 bytes security) (deflated 52%) adding: html/setVariantID.html (332 bytes security) (deflated 56%) adding: html/titv.html (332 bytes security) (deflated 57%) adding: html/variantInfo.html (332 bytes security) (deflated 59%) adding: INDEX (332 bytes security) (deflated 56%) adding: MD5 (332 bytes security) (deflated 49%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 68%) adding: NEWS.Rd (332 bytes security) (deflated 68%) adding: R/ (372 bytes security) (stored 0%) adding: R/SeqVarTools (332 bytes security) (deflated 41%) adding: R/SeqVarTools.rdb (332 bytes security) (deflated 42%) adding: R/SeqVarTools.rdx (332 bytes security) (deflated 2%) adding: unitTests/ (372 bytes security) (stored 0%) adding: unitTests/test_alleleFrequency.R (332 bytes security) (deflated 64%) adding: unitTests/test_alleles.R (332 bytes security) (deflated 76%) adding: unitTests/test_alternateAlleleDetection.R (332 bytes security) (deflated 75%) adding: unitTests/test_applyMethod.R (332 bytes security) (deflated 81%) adding: unitTests/test_countSingletons.R (332 bytes security) (deflated 38%) adding: unitTests/test_duplicateDiscordance.R (332 bytes security) (deflated 82%) adding: unitTests/test_getData.R (332 bytes security) (deflated 82%) adding: unitTests/test_hethom.R (332 bytes security) (deflated 86%) adding: unitTests/test_hwe.R (332 bytes security) (deflated 64%) adding: unitTests/test_inbreedCoeff.R (332 bytes security) (deflated 62%) adding: unitTests/test_Iterator.R (332 bytes security) (deflated 85%) adding: unitTests/test_meanBySample.R (332 bytes security) (deflated 58%) adding: unitTests/test_mendelErr.R (332 bytes security) (deflated 81%) adding: unitTests/test_missingGenotypeRate.R (332 bytes security) (deflated 72%) adding: unitTests/test_pca.R (332 bytes security) (deflated 54%) adding: unitTests/test_refFrac.R (332 bytes security) (deflated 49%) adding: unitTests/test_regression.R (332 bytes security) (deflated 82%) adding: unitTests/test_SeqVarData.R (332 bytes security) (deflated 79%) adding: unitTests/test_setVariantID.R (332 bytes security) (deflated 58%) adding: unitTests/test_titv.R (332 bytes security) (deflated 71%) adding: unitTests/test_utils.R (332 bytes security) (deflated 77%) adding: unitTests/test_VariableLength.R (332 bytes security) (deflated 73%)