Back to Multiple platform build/check report for BioC 3.6
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for BgeeDB on tokay1

This page was generated on 2018-04-12 13:27:58 -0400 (Thu, 12 Apr 2018).

Package 108/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BgeeDB 2.5.0
Julien Wollbrett , Julien Roux , Andrea Komljenovic , Frederic Bastian
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/BgeeDB
Branch: RELEASE_3_6
Last Commit: 2869036
Last Changed Date: 2018-02-26 10:28:01 -0400 (Mon, 26 Feb 2018)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BgeeDB
Version: 2.5.0
Command: rm -rf BgeeDB.buildbin-libdir && mkdir BgeeDB.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/BgeeDB_2.5.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=BgeeDB.buildbin-libdir --merge-multiarch BgeeDB_2.5.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL BgeeDB_2.5.0.zip && rm BgeeDB_2.5.0.tar.gz BgeeDB_2.5.0.zip
StartedAt: 2018-04-11 18:29:54 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:30:49 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 54.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf BgeeDB.buildbin-libdir && mkdir BgeeDB.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/BgeeDB_2.5.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=BgeeDB.buildbin-libdir --merge-multiarch BgeeDB_2.5.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL BgeeDB_2.5.0.zip  && rm BgeeDB_2.5.0.tar.gz BgeeDB_2.5.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  112k  100  112k    0     0  4794k      0 --:--:-- --:--:-- --:--:-- 5626k

install for i386

* installing *source* package 'BgeeDB' ...
** R
** data
** inst
** preparing package for lazy loading

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
  converting help for package 'BgeeDB'
    finding HTML links ... done
    Bgee-class                              html  
    formatData                              html  
    geneList                                html  
    getAnnotation                           html  
    getData                                 html  
    listBgeeRelease                         html  
    listBgeeSpecies                         html  
    loadTopAnatData                         html  
    makeTable                               html  
    topAnat                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
In R CMD INSTALL

install for x64

* installing *source* package 'BgeeDB' ...
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
* MD5 sums
packaged installation of 'BgeeDB' as BgeeDB_2.5.0.zip
* DONE (BgeeDB)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'BgeeDB' successfully unpacked and MD5 sums checked
In R CMD INSTALL