monocle 2.4.0
Cole Trapnell
| Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017) | | URL: https://git.bioconductor.org/packages/monocle | | Branch: RELEASE_3_5 | | Last Commit: 0d98cc2 | | Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | ERROR | skipped | | |
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | OK | ERROR | skipped | skipped | |
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###
### Running command:
###
### chmod a+r monocle -R && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data monocle
###
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* checking for file 'monocle/DESCRIPTION' ... OK
* preparing 'monocle':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ...Warning: running command '"C:/Users/biocbuild/bbs-3.5-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
ERROR
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "num_genes") { :
the condition has length > 1 and only the first element will be used
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Removed 3576038 rows containing non-finite values (stat_density).
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Transformation introduced infinite values in continuous y-axis
Warning in if (method == "DDRTree") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "densityPeak") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "DDRTree") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "densityPeak") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "DDRTree") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "densityPeak") { :
the condition has length > 1 and only the first element will be used
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Transformation introduced infinite values in continuous y-axis
Warning in if (method == "DDRTree") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "densityPeak") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "DDRTree") { :
the condition has length > 1 and only the first element will be used
Warning in if (method == "densityPeak") { :
the condition has length > 1 and only the first element will be used
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Deprecated, use tibble::rownames_to_column() instead.
Warning: Transformation introduced infinite values in continuous y-axis
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in is.na(e1) | is.na(e2) :
longer object length is not a multiple of shorter object length
Warning in `==.default`(State, root_state) :
longer object length is not a multiple of shorter object length
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in is.na(e1) | is.na(e2) :
longer object length is not a multiple of shorter object length
Warning in `==.default`(State, root_state) :
longer object length is not a multiple of shorter object length
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in (ap %*% ab)/(ab %*% ab) * ab :
Recycling array of length 1 in array-vector arithmetic is deprecated.
Use c() or as.vector() instead.
Warning in is.na(e1) | is.na(e2) :
longer object length is not a multiple of shorter object length
Warning in `==.default`(State, root_state) :
longer object length is not a multiple of shorter object length
Warning in (function (A, nv = 5, nu = nv, maxit = 100, work = nv + 7, reorth = TRUE, :
You're computing too large a percentage of total singular values, use a standard svd instead.
Warning in (function (A, nv = 5, nu = nv, maxit = 100, work = nv + 7, reorth = TRUE, :
did not converge--results might be invlaid!; try increasing maxit or fastpath=FALSE
Quitting from lines 651-653 (monocle-vignette.Rnw)
Error: processing vignette 'monocle-vignette.Rnw' failed with diagnostics:
Perplexity is too large.
Execution halted