Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L [M] N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.5: BUILD BIN report for maftools on tokay2

This page was generated on 2017-10-18 14:26:16 -0400 (Wed, 18 Oct 2017).

Package 742/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
maftools 1.2.30
Anand Mayakonda
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/maftools
Branch: RELEASE_3_5
Last Commit: 5873a10
Last Changed Date: 2017-05-22 23:26:26 -0400 (Mon, 22 May 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: maftools
Version: 1.2.30
Command: cd maftools.buildbin-libdir/maftools && zip -r ../../maftools_1.2.30.zip . & cd ../..
StartedAt: 2017-10-18 04:45:23 -0400 (Wed, 18 Oct 2017)
EndedAt: 2017-10-18 04:45:56 -0400 (Wed, 18 Oct 2017)
EllapsedTime: 33.2 seconds
RetCode: 0
Status:  OK  
PackageFile: maftools_1.2.30.zip
PackageFileSize: 9.508 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd maftools.buildbin-libdir/maftools && zip -r ../../maftools_1.2.30.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (264 bytes security) (deflated 51%)
  adding: DESCRIPTION (264 bytes security) (deflated 43%)
  adding: doc/ (304 bytes security) (stored 0%)
  adding: doc/index.html (264 bytes security) (deflated 57%)
  adding: doc/maftools.html (264 bytes security) (deflated 38%)
  adding: doc/maftools.R (264 bytes security) (deflated 71%)
  adding: doc/maftools.Rmd (264 bytes security) (deflated 65%)
  adding: extdata/ (304 bytes security) (stored 0%)
  adding: extdata/all_lesions.conf_99.txt (264 bytes security) (deflated 78%)
  adding: extdata/amp_genes.conf_99.txt (264 bytes security) (deflated 46%)
  adding: extdata/APL_primary.maf.gz (264 bytes security) (stored 0%)
  adding: extdata/APL_relapse.maf.gz (264 bytes security) (stored 0%)
  adding: extdata/coad.maf.gz (264 bytes security) (deflated 0%)
  adding: extdata/del_genes.conf_99.txt (264 bytes security) (deflated 64%)
  adding: extdata/ensGenes.txt.gz (264 bytes security) (deflated 0%)
  adding: extdata/hugo_to_mutSigSymbol.txt.gz (264 bytes security) (stored 0%)
  adding: extdata/LAML_sig_genes.txt.gz (264 bytes security) (deflated 0%)
  adding: extdata/laml_survival.tsv (264 bytes security) (deflated 76%)
  adding: extdata/pancan.txt.gz (264 bytes security) (stored 0%)
  adding: extdata/protein_domains.txt.gz (264 bytes security) (deflated 0%)
  adding: extdata/prot_len.txt.gz (264 bytes security) (deflated 0%)
  adding: extdata/signatures.txt (264 bytes security) (deflated 63%)
  adding: extdata/simple_somatic_mutation.open.ESCA-CN.sample.tsv.gz (264 bytes security) (stored 0%)
  adding: extdata/TCGA.AB.3009.hg19.seg.txt (264 bytes security) (deflated 66%)
  adding: extdata/tcga_cohort.txt.gz (264 bytes security) (deflated 0%)
  adding: extdata/tcga_laml.maf.gz (264 bytes security) (deflated 0%)
  adding: extdata/tcga_laml_fab_annotation.txt (264 bytes security) (deflated 82%)
  adding: extdata/variants.hg19_multianno.txt (264 bytes security) (deflated 88%)
  adding: extdata/variants.tsv (264 bytes security) (deflated 62%)
  adding: help/ (304 bytes security) (stored 0%)
  adding: help/aliases.rds (264 bytes security) (stored 0%)
  adding: help/AnIndex (264 bytes security) (deflated 67%)
  adding: help/maftools.rdb (264 bytes security) (deflated 2%)
  adding: help/maftools.rdx (264 bytes security) (stored 0%)
  adding: help/paths.rds (264 bytes security) (stored 0%)
  adding: html/ (304 bytes security) (stored 0%)
  adding: html/00Index.html (264 bytes security) (deflated 75%)
  adding: html/R.css (264 bytes security) (deflated 75%)
  adding: INDEX (264 bytes security) (deflated 65%)
  adding: LICENSE (264 bytes security) (stored 0%)
  adding: MD5 (264 bytes security) (deflated 44%)
  adding: Meta/ (304 bytes security) (stored 0%)
  adding: Meta/features.rds (264 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
  adding: Meta/links.rds (264 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
  adding: Meta/package.rds (264 bytes security) (stored 0%)
  adding: Meta/Rd.rds (264 bytes security) (stored 0%)
  adding: Meta/vignette.rds (264 bytes security) (stored 0%)
  adding: NAMESPACE (264 bytes security) (deflated 63%)
  adding: NEWS (264 bytes security) (deflated 54%)
  adding: R/ (304 bytes security) (stored 0%)
  adding: R/maftools (264 bytes security) (deflated 41%)
  adding: R/maftools.rdb (264 bytes security) (deflated 2%)
  adding: R/maftools.rdx (264 bytes security) (stored 0%)