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BioC 3.5: INSTALL report for charm on tokay2

This page was generated on 2017-10-18 14:20:39 -0400 (Wed, 18 Oct 2017).

Package 199/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
charm 2.22.0
Peter Murakami
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/charm
Branch: RELEASE_3_5
Last Commit: 5bebee9
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: charm
Version: 2.22.0
Command: rm -rf charm.buildbin-libdir && mkdir charm.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/charm_2.22.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=charm.buildbin-libdir --merge-multiarch charm_2.22.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL charm_2.22.0.zip && rm charm_2.22.0.tar.gz charm_2.22.0.zip
StartedAt: 2017-10-17 18:37:49 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:38:42 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 53.1 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf charm.buildbin-libdir && mkdir charm.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/charm_2.22.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=charm.buildbin-libdir --merge-multiarch charm_2.22.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL charm_2.22.0.zip  && rm charm_2.22.0.tar.gz charm_2.22.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 86701  100 86701    0     0  4404k      0 --:--:-- --:--:-- --:--:-- 4703k

install for i386

* installing *source* package 'charm' ...
** R
** inst
** preparing package for lazy loading
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'oligoClasses'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'oligoClasses'

install for x64

* installing *source* package 'charm' ...
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'oligoClasses'
* MD5 sums
packaged installation of 'charm' as charm_2.22.0.zip
* DONE (charm)
* installing to library 'C:/Users/biocbuild/bbs-3.5-bioc/R/library'
package 'charm' successfully unpacked and MD5 sums checked