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BioC 3.5: BUILD report for Rnits on malbec2

This page was generated on 2017-10-18 14:16:07 -0400 (Wed, 18 Oct 2017).

Package 1135/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rnits 1.10.0
Dipen P. Sangurdekar
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/Rnits
Branch: RELEASE_3_5
Last Commit: 4adadd7
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: Rnits
Version: 1.10.0
Command: /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rnits
StartedAt: 2017-10-17 19:41:34 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 19:41:46 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 11.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rnits
###
##############################################################################
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* checking for file ‘Rnits/DESCRIPTION’ ... OK
* preparing ‘Rnits’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Warning in download.file(sprintf("https://ftp.ncbi.nlm.nih.gov/geo/series/%s/%s/matrix/%s",  :
  URL https://ftp.ncbi.nlm.nih.gov/geo/series/GSE4nnn/GSE4158/matrix//geo/series/GSE4nnn/GSE4158/: cannot open destfile '/tmp/RtmpLISWXZ//geo/series/GSE4nnn/GSE4158/', reason 'No such file or directory'
Warning in download.file(sprintf("https://ftp.ncbi.nlm.nih.gov/geo/series/%s/%s/matrix/%s",  :
  download had nonzero exit status
Warning in file(con, "r") :
  cannot open file '/tmp/RtmpLISWXZ//geo/series/GSE4nnn/GSE4158/': No such file or directory
Quitting from lines 90-114 (Rnits-vignette.Rnw) 
Error: processing vignette 'Rnits-vignette.Rnw' failed with diagnostics:
cannot open the connection
Execution halted