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BioC 3.5: INSTALL report for AnnotationDbi on tokay2

This page was generated on 2017-10-18 14:19:33 -0400 (Wed, 18 Oct 2017).

Package 48/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationDbi 1.38.2
Bioconductor Package Maintainer
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/AnnotationDbi
Branch: RELEASE_3_5
Last Commit: 67d46fa
Last Changed Date: 2017-07-25 17:39:19 -0400 (Tue, 25 Jul 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: AnnotationDbi
Version: 1.38.2
Command: rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/AnnotationDbi_1.38.2.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=AnnotationDbi.buildbin-libdir --merge-multiarch AnnotationDbi_1.38.2.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.38.2.zip && rm AnnotationDbi_1.38.2.tar.gz AnnotationDbi_1.38.2.zip
StartedAt: 2017-10-17 18:14:14 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:19:53 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 339.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/AnnotationDbi_1.38.2.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=AnnotationDbi.buildbin-libdir --merge-multiarch AnnotationDbi_1.38.2.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.38.2.zip  && rm AnnotationDbi_1.38.2.tar.gz AnnotationDbi_1.38.2.zip
###
##############################################################################
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3861k  100 3861k    0     0  60.5M      0 --:--:-- --:--:-- --:--:-- 61.8M

install for i386

* installing *source* package 'AnnotationDbi' ...
** R
** inst
** preparing package for lazy loading
in method for 'initialize' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'toString' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'show' with signature '"L2Rlink"': no definition for class "L2Rlink"
in method for 'rev' with signature '"L2Rlink"': no definition for class "L2Rlink"
Creating a new generic function for 'packageName' in package 'AnnotationDbi'
Creating a generic function for 'ls' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'eapply' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'exists' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'sample' from package 'base' in package 'AnnotationDbi'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'AnnotationDbi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationDbi' as AnnotationDbi_1.38.2.zip
* DONE (AnnotationDbi)
* installing to library 'C:/Users/biocbuild/bbs-3.5-bioc/R/library'
package 'AnnotationDbi' successfully unpacked and MD5 sums checked