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BioC 3.5: INSTALL report for phenoTest on tokay2

This page was generated on 2017-10-18 14:21:03 -0400 (Wed, 18 Oct 2017).

Package 975/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phenoTest 1.24.0
Evarist Planet
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/phenoTest
Branch: RELEASE_3_5
Last Commit: b7188ae
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: phenoTest
Version: 1.24.0
Command: rm -rf phenoTest.buildbin-libdir && mkdir phenoTest.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/phenoTest_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=phenoTest.buildbin-libdir --merge-multiarch phenoTest_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL phenoTest_1.24.0.zip && rm phenoTest_1.24.0.tar.gz phenoTest_1.24.0.zip
StartedAt: 2017-10-17 18:34:28 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:35:24 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 56.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf phenoTest.buildbin-libdir && mkdir phenoTest.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/phenoTest_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=phenoTest.buildbin-libdir --merge-multiarch phenoTest_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL phenoTest_1.24.0.zip  && rm phenoTest_1.24.0.tar.gz phenoTest_1.24.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  971k  100  971k    0     0  14.4M      0 --:--:-- --:--:-- --:--:-- 14.8M

install for i386

* installing *source* package 'phenoTest' ...
** R
** data
** inst
** preparing package for lazy loading
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'oligoClasses'
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'oligoClasses'
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'

install for x64

* installing *source* package 'phenoTest' ...
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'oligoClasses'
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
* MD5 sums
packaged installation of 'phenoTest' as phenoTest_1.24.0.zip
* DONE (phenoTest)
* installing to library 'C:/Users/biocbuild/bbs-3.5-bioc/R/library'
package 'phenoTest' successfully unpacked and MD5 sums checked