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BioC 3.4: INSTALL report for bamsignals on malbec1

This page was generated on 2017-04-15 16:12:49 -0400 (Sat, 15 Apr 2017).

Package 82/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bamsignals 1.6.0
Alessandro Mammana
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/bamsignals
Last Changed Rev: 122710 / Revision: 128728
Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: bamsignals
Version: 1.6.0
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL bamsignals
StartedAt: 2017-04-14 18:01:58 -0400 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 18:02:14 -0400 (Fri, 14 Apr 2017)
EllapsedTime: 15.8 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL bamsignals
###
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* installing to library ‘/home/biocbuild/bbs-3.4-bioc/R/library’
* installing *source* package ‘bamsignals’ ...
** libs
g++ -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/zlibbioc/include"   -fpic  -g -O2  -Wall -c CountSignals.cpp -o CountSignals.o
g++ -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/zlibbioc/include"   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/zlibbioc/include"   -fpic  -g -O2  -Wall -c bamsignals.cpp -o bamsignals.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/zlibbioc/include"   -fpic  -g -O2  -Wall -c bamsignals_init.c -o bamsignals_init.o
g++ -shared -L/home/biocbuild/bbs-3.4-bioc/R/lib -L/usr/local/lib -o bamsignals.so CountSignals.o RcppExports.o bamsignals.o bamsignals_init.o -L/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/lib -Wl,-rpath,/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/lib -lhts -lz -pthread -L/home/biocbuild/bbs-3.4-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.4-bioc/R/library/bamsignals/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (bamsignals)