simpleaffy 2.48.0
Crispin Miller
| Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/simpleaffy | | Last Changed Rev: 117079 / Revision: 122332 | | Last Changed Date: 2016-05-03 14:20:18 -0700 (Tue, 03 May 2016) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | [ OK ] | OK | WARNINGS | OK | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf simpleaffy.buildbin-libdir && mkdir simpleaffy.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/simpleaffy_2.48.0.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=simpleaffy.buildbin-libdir --merge-multiarch simpleaffy_2.48.0.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL simpleaffy_2.48.0.zip && rm simpleaffy_2.48.0.tar.gz simpleaffy_2.48.0.zip
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'simpleaffy' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"E:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -I"c:/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c simpleaffy.c -o simpleaffy.o
simpleaffy.c: In function 'bgmas':
simpleaffy.c:440:30: warning: passing argument 1 of 'REprintf' from incompatible pointer type
if(gn >= ngrid) REprintf(stderr,"Really ouch! %d %d\n",gn,ends[gn]);
^
In file included from E:/biocbld/BBS-3˜1.3-B/R/include/R.h:72:0,
from simpleaffy.c:5:
E:/biocbld/BBS-3˜1.3-B/R/include/R_ext/Print.h:40:6: note: expected 'const char *' but argument is of type 'struct FILE *'
void REprintf(const char *, ...);
^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o simpleaffy.dll tmp.def simpleaffy.o -Lc:/local323/lib/i386 -Lc:/local323/lib -LE:/biocbld/BBS-3˜1.3-B/R/bin/i386 -lR
installing to E:/biocbld/bbs-3.3-bioc/meat/simpleaffy.buildbin-libdir/simpleaffy/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'simpleaffy' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"E:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -I"c:/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c simpleaffy.c -o simpleaffy.o
simpleaffy.c: In function 'bgmas':
simpleaffy.c:440:30: warning: passing argument 1 of 'REprintf' from incompatible pointer type
if(gn >= ngrid) REprintf(stderr,"Really ouch! %d %d\n",gn,ends[gn]);
^
In file included from E:/biocbld/BBS-3˜1.3-B/R/include/R.h:72:0,
from simpleaffy.c:5:
E:/biocbld/BBS-3˜1.3-B/R/include/R_ext/Print.h:40:6: note: expected 'const char *' but argument is of type 'struct FILE *'
void REprintf(const char *, ...);
^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o simpleaffy.dll tmp.def simpleaffy.o -Lc:/local323/lib/x64 -Lc:/local323/lib -LE:/biocbld/BBS-3˜1.3-B/R/bin/x64 -lR
installing to E:/biocbld/bbs-3.3-bioc/meat/simpleaffy.buildbin-libdir/simpleaffy/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'simpleaffy' as simpleaffy_2.48.0.zip
* DONE (simpleaffy)
* installing to library 'E:/biocbld/bbs-3.3-bioc/R/library'
package 'simpleaffy' successfully unpacked and MD5 sums checked