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BioC 3.3: INSTALL report for impute on zin2

This page was generated on 2016-10-13 12:40:52 -0700 (Thu, 13 Oct 2016).

Package 585/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
impute 1.46.0
Balasubramanian Narasimhan
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/impute
Last Changed Rev: 117079 / Revision: 122332
Last Changed Date: 2016-05-03 14:20:18 -0700 (Tue, 03 May 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: impute
Version: 1.46.0
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD INSTALL impute
StartedAt: 2016-10-12 18:00:40 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 18:00:43 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 3.0 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD INSTALL impute
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.3-bioc/R/library’
* installing *source* package ‘impute’ ...
** libs
gfortran   -fpic  -g -O2  -Wall -c knnimpute.f -o knnimpute.o
Warning: Nonconforming tab character in column 1 of line 89
Warning: Nonconforming tab character in column 1 of line 91
Warning: Nonconforming tab character in column 1 of line 92
Warning: Nonconforming tab character in column 1 of line 93
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Warning: Nonconforming tab character in column 1 of line 97
Warning: Nonconforming tab character in column 1 of line 98
Warning: Nonconforming tab character in column 3 of line 99
Warning: Nonconforming tab character in column 1 of line 100
Warning: Nonconforming tab character in column 1 of line 101
Warning: Nonconforming tab character in column 1 of line 102
Warning: Nonconforming tab character in column 1 of line 103
Warning: Nonconforming tab character in column 3 of line 104
Warning: Nonconforming tab character in column 1 of line 105
Warning: Nonconforming tab character in column 1 of line 106
Warning: Nonconforming tab character in column 1 of line 107
Warning: Nonconforming tab character in column 1 of line 108
Warning: Nonconforming tab character in column 1 of line 109
Warning: Nonconforming tab character in column 1 of line 110
Warning: Nonconforming tab character in column 1 of line 111
Warning: Nonconforming tab character in column 1 of line 112
Warning: Nonconforming tab character in column 3 of line 113
Warning: Nonconforming tab character in column 1 of line 114
Warning: Nonconforming tab character in column 1 of line 115
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Warning: Nonconforming tab character in column 1 of line 117
Warning: Nonconforming tab character in column 3 of line 118
Warning: Nonconforming tab character in column 3 of line 119
Warning: Nonconforming tab character in column 3 of line 120
Warning: Nonconforming tab character in column 1 of line 121
Warning: Nonconforming tab character in column 1 of line 122
knnimpute.f: In function ‘twomis’:
knnimpute.f:168:0: warning: ‘dold’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       ratio=dabs(dnew-dold)/dold
 ^
gcc -std=gnu99 -shared -L/home/biocbuild/bbs-3.3-bioc/R/lib -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.3-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.3-bioc/R/library/impute/libs
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (impute)