ggtree 1.4.20
Guangchuang Yu
| Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/ggtree | | Last Changed Rev: 120677 / Revision: 122332 | | Last Changed Date: 2016-09-02 02:46:01 -0700 (Fri, 02 Sep 2016) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | [ OK ] | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd ggtree.buildbin-libdir/ggtree && zip -r ../../ggtree_1.4.20.zip . & cd ../..
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Scanning files
adding: as.phylo.igraph.R (188 bytes security) (deflated 11%)
adding: CITATION (188 bytes security) (deflated 58%)
adding: DESCRIPTION (188 bytes security) (deflated 43%)
adding: doc/ (256 bytes security) (stored 0%)
adding: doc/advanceTreeAnnotation.html (188 bytes security) (deflated 51%)
adding: doc/advanceTreeAnnotation.R (188 bytes security) (deflated 64%)
adding: doc/advanceTreeAnnotation.Rmd (188 bytes security) (deflated 57%)
adding: doc/ggtree.html (188 bytes security) (deflated 68%)
adding: doc/ggtree.R (188 bytes security) (deflated 56%)
adding: doc/ggtree.Rmd (188 bytes security) (deflated 58%)
adding: doc/ggtreeUtilities.html (188 bytes security) (deflated 60%)
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adding: doc/index.html (188 bytes security) (deflated 82%)
adding: doc/treeAnnotation.html (188 bytes security) (deflated 52%)
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adding: doc/treeAnnotation.Rmd (188 bytes security) (deflated 64%)
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adding: doc/treeImport.R (188 bytes security) (deflated 76%)
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adding: doc/treeManipulation.Rmd (188 bytes security) (deflated 65%)
adding: doc/treeVisualization.html (188 bytes security) (deflated 52%)
adding: doc/treeVisualization.R (188 bytes security) (deflated 78%)
adding: doc/treeVisualization.Rmd (188 bytes security) (deflated 65%)
adding: examples/ (256 bytes security) (stored 0%)
adding: examples/FluA_H3_AA.fas (188 bytes security) (deflated 94%)
adding: examples/Genotype.txt (188 bytes security) (deflated 85%)
adding: examples/MCC_FluA_H3.tree (188 bytes security) (deflated 67%)
adding: examples/mlc (188 bytes security) (deflated 91%)
adding: examples/NAG_inHA1.txt (188 bytes security) (deflated 63%)
adding: examples/rst (188 bytes security) (deflated 97%)
adding: examples/sites.txt (188 bytes security) (deflated 54%)
adding: extdata/ (256 bytes security) (stored 0%)
adding: extdata/ADH.nhx (188 bytes security) (deflated 49%)
adding: extdata/BEAST/ (256 bytes security) (stored 0%)
adding: extdata/BEAST/beast_mcc.tree (188 bytes security) (deflated 66%)
adding: extdata/HYPHY/ (256 bytes security) (stored 0%)
adding: extdata/HYPHY/ancseq.nex (188 bytes security) (deflated 93%)
adding: extdata/HYPHY/labelledtree.tree (188 bytes security) (deflated 50%)
adding: extdata/pa.fas (188 bytes security) (deflated 93%)
adding: extdata/pa.nwk (188 bytes security) (deflated 45%)
adding: extdata/PAML_Baseml/ (256 bytes security) (stored 0%)
adding: extdata/PAML_Baseml/mlb (188 bytes security) (deflated 86%)
adding: extdata/PAML_Baseml/rst (188 bytes security) (deflated 93%)
adding: extdata/PAML_Codeml/ (256 bytes security) (stored 0%)
adding: extdata/PAML_Codeml/mlc (188 bytes security) (deflated 86%)
adding: extdata/PAML_Codeml/rst (188 bytes security) (deflated 93%)
adding: extdata/pa_subs.csv (188 bytes security) (deflated 44%)
adding: extdata/r8s/ (256 bytes security) (stored 0%)
adding: extdata/r8s/H3.r8s (188 bytes security) (deflated 73%)
adding: extdata/r8s/H3.tree (188 bytes security) (deflated 63%)
adding: extdata/r8s/H3_r8s_output.log (188 bytes security) (deflated 85%)
adding: extdata/RAxML/ (256 bytes security) (stored 0%)
adding: extdata/RAxML/Dated_FluA_H3.fas (188 bytes security) (deflated 95%)
adding: extdata/RAxML/RAxML_bestTree.H3 (188 bytes security) (deflated 58%)
adding: extdata/RAxML/RAxML_bipartitions.H3 (188 bytes security) (deflated 58%)
adding: extdata/RAxML/RAxML_bipartitionsBranchLabels.H3 (188 bytes security) (deflated 58%)
adding: extdata/RAxML/RAxML_bootstrap.H3 (188 bytes security) (deflated 96%)
adding: extdata/RAxML/RAxML_info.H3 (188 bytes security) (deflated 77%)
adding: extdata/sample.jplace (188 bytes security) (deflated 47%)
adding: extdata/sample.nwk (188 bytes security) (deflated 25%)
adding: extdata/sample.phy (188 bytes security) (deflated 89%)
adding: extdata/twoD.tree (188 bytes security) (deflated 75%)
adding: help/ (256 bytes security) (stored 0%)
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adding: help/ggtree.rdb (188 bytes security) (deflated 4%)
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adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (256 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 85%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 75%)
adding: MD5 (188 bytes security) (deflated 48%)
adding: Meta/ (256 bytes security) (stored 0%)
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adding: Meta/links.rds (188 bytes security) (stored 0%)
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adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: Meta/vignette.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 75%)
adding: NEWS (188 bytes security) (deflated 72%)
adding: R/ (256 bytes security) (stored 0%)
adding: R/ggtree (188 bytes security) (deflated 41%)
adding: R/ggtree.rdb (188 bytes security) (deflated 14%)
adding: R/ggtree.rdx (188 bytes security) (stored 0%)