Back to the "Multiple platform build/check report" A  B  C [D] E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.3: BUILD report for diffloop on zin2

This page was generated on 2016-10-13 12:46:44 -0700 (Thu, 13 Oct 2016).

Package 304/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
diffloop 1.0.3
Caleb Lareau
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/diffloop
Last Changed Rev: 122112 / Revision: 122332
Last Changed Date: 2016-10-09 11:43:03 -0700 (Sun, 09 Oct 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded [ ERROR ] skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  ERROR  skipped  skipped 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: diffloop
Version: 1.0.3
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data diffloop
StartedAt: 2016-10-12 22:56:47 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 22:57:14 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 26.9 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data diffloop
###
##############################################################################
##############################################################################


* checking for file ‘diffloop/DESCRIPTION’ ... OK
* preparing ‘diffloop’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval,
    evalq, get, grep, grepl, intersect, is.unsorted, lapply,
    lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rownames, sapply, setdiff, sort,
    table, tapply, union, unique, unsplit

Loading required package: S4Vectors
Loading required package: stats4

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    colMeans, colSums, expand.grid, rowMeans, rowSums

Loading required package: IRanges
Loading required package: GenomeInfoDb
Quitting from lines 58-62 (diffloop.Rmd) 
Error: processing vignette 'diffloop.Rmd' failed with diagnostics:
task 1 failed - "length of 'dimnames' [2] not equal to array extent"
Execution halted