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BioC 3.3: BUILD BIN report for PureCN on moscato2

This page was generated on 2016-10-13 12:55:16 -0700 (Thu, 13 Oct 2016).

Package 900/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PureCN 1.0.4
Markus Riester
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/PureCN
Last Changed Rev: 119085 / Revision: 122332
Last Changed Date: 2016-07-01 14:31:44 -0700 (Fri, 01 Jul 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: PureCN
Version: 1.0.4
Command: cd PureCN.buildbin-libdir/PureCN && zip -r ../../PureCN_1.0.4.zip . & cd ../..
StartedAt: 2016-10-13 11:16:02 -0700 (Thu, 13 Oct 2016)
EndedAt: 2016-10-13 11:16:35 -0700 (Thu, 13 Oct 2016)
EllapsedTime: 32.9 seconds
RetCode: 0
Status:  OK  
PackageFile: PureCN_1.0.4.zip
PackageFileSize: 3.172 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd PureCN.buildbin-libdir/PureCN && zip -r ../../PureCN_1.0.4.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: data/ (256 bytes security) (stored 0%)
  adding: data/chr.hash.rda (188 bytes security) (stored 0%)
  adding: data/purecn.example.output.rda (188 bytes security) (deflated 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 42%)
  adding: doc/ (256 bytes security) (stored 0%)
  adding: doc/index.html (188 bytes security) (deflated 58%)
  adding: doc/PureCN.pdf (188 bytes security) (deflated 18%)
  adding: doc/PureCN.R (188 bytes security) (deflated 76%)
  adding: doc/PureCN.Rnw (188 bytes security) (deflated 63%)
  adding: extdata/ (256 bytes security) (stored 0%)
  adding: extdata/example_gc.gene.file.txt (188 bytes security) (deflated 70%)
  adding: extdata/example_normal.txt (188 bytes security) (deflated 57%)
  adding: extdata/example_normal2.txt (188 bytes security) (deflated 57%)
  adding: extdata/example_tumor.txt (188 bytes security) (deflated 56%)
  adding: extdata/example_vcf.vcf (188 bytes security) (deflated 74%)
  adding: help/ (256 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 63%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: help/PureCN.rdb (188 bytes security) (deflated 1%)
  adding: help/PureCN.rdx (188 bytes security) (stored 0%)
  adding: html/ (256 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 70%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 56%)
  adding: MD5 (188 bytes security) (deflated 44%)
  adding: Meta/ (256 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 58%)
  adding: NEWS (188 bytes security) (stored 0%)
  adding: R/ (256 bytes security) (stored 0%)
  adding: R/PureCN (188 bytes security) (deflated 41%)
  adding: R/PureCN.rdb (188 bytes security) (deflated 1%)
  adding: R/PureCN.rdx (188 bytes security) (stored 0%)
  adding: unitTests/ (256 bytes security) (stored 0%)
  adding: unitTests/test_createCurationFile.R (188 bytes security) (deflated 53%)
  adding: unitTests/test_getSexFromCoverage.R (188 bytes security) (deflated 63%)
  adding: unitTests/test_readCoverageGatk.R (188 bytes security) (deflated 34%)
  adding: unitTests/test_runAbsoluteCN.R (188 bytes security) (deflated 63%)
  adding: unitTests/test_setPriorVcf.R (188 bytes security) (deflated 44%)