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BioC 3.3: BUILD BIN report for IONiseR on oaxaca

This page was generated on 2016-10-13 13:01:51 -0700 (Thu, 13 Oct 2016).

Package 596/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 1.2.3
Mike Smith
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/IONiseR
Last Changed Rev: 120784 / Revision: 122332
Last Changed Date: 2016-09-07 02:44:08 -0700 (Wed, 07 Sep 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: IONiseR
Version: 1.2.3
Command: rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh IONiseR_1.2.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R IONiseR.buildbin-libdir
StartedAt: 2016-10-13 07:43:22 -0700 (Thu, 13 Oct 2016)
EndedAt: 2016-10-13 07:43:36 -0700 (Thu, 13 Oct 2016)
EllapsedTime: 14.1 seconds
RetCode: 0
Status:  OK 
PackageFile: IONiseR_1.2.3.tgz
PackageFileSize: 2.26 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh IONiseR_1.2.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R IONiseR.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=IONiseR.buildbin-libdir IONiseR_1.2.3.tar.gz'
>>>>>>> 

* installing *source* package ‘IONiseR’ ...
** R
** inst
** preparing package for lazy loading
in method for ‘readInfo’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘rawData’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘baseCalled’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘fastq’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘[’ with signature ‘"Fast5Summary","ANY"’: no definition for class “Fast5Summary”
in method for ‘fastqTemplate’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘fastqComplement’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘fastq2D’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (IONiseR)