Back to the "Multiple platform build/check report" A [B] C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.3: INSTALL report for BSgenome on moscato2

This page was generated on 2016-10-13 12:47:49 -0700 (Thu, 13 Oct 2016).

Package 133/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BSgenome 1.40.1
H. Pagès
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/BSgenome
Last Changed Rev: 118623 / Revision: 122332
Last Changed Date: 2016-06-15 11:15:45 -0700 (Wed, 15 Jun 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: BSgenome
Version: 1.40.1
Command: rm -rf BSgenome.buildbin-libdir && mkdir BSgenome.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/BSgenome_1.40.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=BSgenome.buildbin-libdir --merge-multiarch BSgenome_1.40.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL BSgenome_1.40.1.zip && rm BSgenome_1.40.1.tar.gz BSgenome_1.40.1.zip
StartedAt: 2016-10-12 19:08:54 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 19:10:56 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 122.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf BSgenome.buildbin-libdir && mkdir BSgenome.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.3/bioc/src/contrib/BSgenome_1.40.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --library=BSgenome.buildbin-libdir --merge-multiarch BSgenome_1.40.1.tar.gz && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL BSgenome_1.40.1.zip  && rm BSgenome_1.40.1.tar.gz BSgenome_1.40.1.zip
###
##############################################################################
##############################################################################




install for i386

* installing *source* package 'BSgenome' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'BSgenome' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BSgenome' as BSgenome_1.40.1.zip
* DONE (BSgenome)
* installing to library 'E:/biocbld/bbs-3.3-bioc/R/library'
package 'BSgenome' successfully unpacked and MD5 sums checked