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BioC 3.2: INSTALL report for minet on moscato1

This page was generated on 2016-04-23 10:16:41 -0700 (Sat, 23 Apr 2016).

Package 645/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
minet 3.28.0
Patrick E. Meyer
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/minet
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: minet
Version: 3.28.0
Command: rm -rf minet.buildbin-libdir && mkdir minet.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/minet_3.28.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=minet.buildbin-libdir --merge-multiarch minet_3.28.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL minet_3.28.0.zip && rm minet_3.28.0.tar.gz minet_3.28.0.zip
StartedAt: 2016-04-22 17:56:32 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 17:58:35 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 122.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf minet.buildbin-libdir && mkdir minet.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/minet_3.28.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=minet.buildbin-libdir --merge-multiarch minet_3.28.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL minet_3.28.0.zip  && rm minet_3.28.0.tar.gz minet_3.28.0.zip
###
##############################################################################
##############################################################################


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100 57383  100 57383    0     0  4800k      0 --:--:-- --:--:-- --:--:-- 7004k

install for i386

* installing *source* package 'minet' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c aracne.cpp -o aracne.o
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c clr.cpp -o clr.o
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c minet.cpp -o minet.o
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c mrnet.cpp -o mrnet.o
mrnet.cpp: In function 'SEXPREC* mrnet(SEXP, SEXP)':
mrnet.cpp:190:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c validate.cpp -o validate.o
g++ -m32 -shared -s -static-libgcc -o minet.dll tmp.def aracne.o clr.o minet.o mrnet.o validate.o -Ld:/RCompile/r-compiling/local/local323/lib/i386 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/minet.buildbin-libdir/minet/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'minet' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c aracne.cpp -o aracne.o
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c clr.cpp -o clr.o
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c minet.cpp -o minet.o
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c mrnet.cpp -o mrnet.o
mrnet.cpp: In function 'SEXPREC* mrnet(SEXP, SEXP)':
mrnet.cpp:190:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c validate.cpp -o validate.o
g++ -m64 -shared -s -static-libgcc -o minet.dll tmp.def aracne.o clr.o minet.o mrnet.o validate.o -Ld:/RCompile/r-compiling/local/local323/lib/x64 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/minet.buildbin-libdir/minet/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'minet' as minet_3.28.0.zip
* DONE (minet)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'minet' successfully unpacked and MD5 sums checked