metagenomeSeq 1.12.1
Joseph N. Paulson
| Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/metagenomeSeq | | Last Changed Rev: 116422 / Revision: 116712 | | Last Changed Date: 2016-04-17 13:10:43 -0700 (Sun, 17 Apr 2016) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | OK | OK | WARNINGS | [ OK ] | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### cd metagenomeSeq.buildbin-libdir/metagenomeSeq && zip -r ../../metagenomeSeq_1.12.1.zip . & cd ../..
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adding: CITATION (188 bytes security) (deflated 70%)
adding: data/ (208 bytes security) (stored 0%)
adding: data/lungData.rda (188 bytes security) (deflated 16%)
adding: data/mouseData.rda (188 bytes security) (deflated 0%)
adding: DESCRIPTION (188 bytes security) (deflated 42%)
adding: doc/ (208 bytes security) (stored 0%)
adding: doc/fitTimeSeries.pdf (188 bytes security) (deflated 10%)
adding: doc/fitTimeSeries.Rnw (188 bytes security) (deflated 60%)
adding: doc/index.html (188 bytes security) (deflated 65%)
adding: doc/metagenomeSeq.pdf (188 bytes security) (deflated 13%)
adding: doc/metagenomeSeq.Rnw (188 bytes security) (deflated 65%)
adding: extdata/ (208 bytes security) (stored 0%)
adding: extdata/CHK_clinical.csv (188 bytes security) (deflated 87%)
adding: extdata/CHK_NAME.otus.count.csv (188 bytes security) (deflated 96%)
adding: extdata/CHK_otus.taxonomy.csv (188 bytes security) (deflated 87%)
adding: help/ (208 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 71%)
adding: help/metagenomeSeq.rdb (188 bytes security) (deflated 3%)
adding: help/metagenomeSeq.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (208 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 81%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 72%)
adding: MD5 (188 bytes security) (deflated 45%)
adding: Meta/ (208 bytes security) (stored 0%)
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adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: Meta/vignette.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 55%)
adding: NEWS (188 bytes security) (deflated 53%)
adding: R/ (208 bytes security) (stored 0%)
adding: R/metagenomeSeq (188 bytes security) (deflated 41%)
adding: R/metagenomeSeq.rdb (188 bytes security) (deflated 19%)
adding: R/metagenomeSeq.rdx (188 bytes security) (stored 0%)
adding: unitTests/ (208 bytes security) (stored 0%)
adding: unitTests/test_calcNormFactors.R (188 bytes security) (deflated 59%)
adding: unitTests/test_cumNorm.R (188 bytes security) (deflated 25%)
adding: unitTests/test_cumNormStat.R (188 bytes security) (deflated 21%)
adding: unitTests/test_cumNormStatFast.R (188 bytes security) (deflated 23%)