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BioC 3.2: BUILD BIN report for fCI on oaxaca

This page was generated on 2016-04-23 10:29:24 -0700 (Sat, 23 Apr 2016).

Package 338/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fCI 1.0.0
Shaojun Tang
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/fCI
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: fCI
Version: 1.0.0
Command: rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh fCI_1.0.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R fCI.buildbin-libdir
StartedAt: 2016-04-23 05:40:25 -0700 (Sat, 23 Apr 2016)
EndedAt: 2016-04-23 05:40:29 -0700 (Sat, 23 Apr 2016)
EllapsedTime: 3.5 seconds
RetCode: 0
Status:  OK 
PackageFile: fCI_1.0.0.tgz
PackageFileSize: 473.5 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh fCI_1.0.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R fCI.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=fCI.buildbin-libdir fCI_1.0.0.tar.gz'
>>>>>>> 

* installing *source* package ‘fCI’ ...
** R
** data
** inst
** preparing package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Warning: replacing previous import ‘psych::logit’ by ‘gtools::logit’ when loading ‘fCI’
in method for ‘initialize’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘normalization’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘populate’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘find.fci.targets’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘show.targets’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘call.npci’ with signature ‘"NPCI"’: no definition for class “NPCI”
in method for ‘compute’ with signature ‘"NPCI"’: no definition for class “NPCI”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Warning: replacing previous import ‘psych::logit’ by ‘gtools::logit’ when loading ‘fCI’
* DONE (fCI)