BioC 3.2: BUILD report for RamiGO on oaxaca

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RamiGO
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* checking for file ‘RamiGO/DESCRIPTION’ ... OK
* preparing ‘RamiGO’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX .
Creating pdf output from LaTeX ...

This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013)
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entering extended mode
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[]\T1/fi4/m/n/10 leaves(object) <- value\T1/ptm/m/n/10 Sets the the data.frame 
con-tain-ing the leaves of the tree with the columns
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[]\T1/ptm/m/n/10 See [][]$\T1/fi4/m/n/10 http : / / rcytoscape . systemsbiology
 . net / versions / current/$[][] \T1/ptm/m/n/10 and [][]$\T1/fi4/m/n/10 http :
 / / www . bioconductor .
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[]\T1/ptm/m/n/10 Subramanian A, Tamayo P, Mootha VK, Mukher-jee S, Ebert BL, Gi
llette MA, Paulovich A, Pomeroy
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[]\T1/ptm/m/n/10 The edge col-ors in the tree rep-re-sent the re-la-tion-ship b
e-tween two nodes. In par-tic-u-lar: green=positively

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 []\T1/fi4/m/n/9 ss <- getAmigoTree(goIDs=goIDs,color=color,filename="example",
picType="svg",saveResult=FALSE)[] 

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 []\T1/fi4/m/n/9 dd <- getAmigoTree(goIDs=goIDs,color=color,filename="example",
picType="dot",saveResult=FALSE)[] 

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 []\T1/fi4/m/n/9 #goIDs <- c("GO:0051130","GO:0050789","GO:0019912","GO:0016301
","GO:0003824","GO:0005783","GO:0043229")[] 
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Package rerunfilecheck Warning: File `Rd2.out' has changed.
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Output written on Rd2.pdf (12 pages, 89447 bytes).
Transcript written on Rd2.log.
Saving output to ‘/private/tmp/Rtmp7Eqmex/Rbuildbd8c2a544e/RamiGO/build/RamiGO.pdf’ ...
Done
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘RamiGO_1.16.0.tar.gz’
BioC 3.2: BUILD report for RamiGO on oaxaca

Summary

Command output
