Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q [R] S  T  U  V  W  X  Y  Z 

BioC 3.2: CHECK report for RTCA on moscato1

This page was generated on 2016-04-23 10:17:01 -0700 (Sat, 23 Apr 2016).

Package 922/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RTCA 1.22.0
Jitao David Zhang
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/RTCA
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK [ OK ] OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: RTCA
Version: 1.22.0
Command: rm -rf RTCA.buildbin-libdir RTCA.Rcheck && mkdir RTCA.buildbin-libdir RTCA.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=RTCA.buildbin-libdir RTCA_1.22.0.tar.gz >RTCA.Rcheck\00install.out 2>&1 && cp RTCA.Rcheck\00install.out RTCA-install.out && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=RTCA.buildbin-libdir --install="check:RTCA-install.out" --force-multiarch --no-vignettes --timings RTCA_1.22.0.tar.gz
StartedAt: 2016-04-23 07:08:34 -0700 (Sat, 23 Apr 2016)
EndedAt: 2016-04-23 07:10:13 -0700 (Sat, 23 Apr 2016)
EllapsedTime: 98.6 seconds
RetCode: 0
Status:  OK  
CheckDir: RTCA.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf RTCA.buildbin-libdir RTCA.Rcheck && mkdir RTCA.buildbin-libdir RTCA.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=RTCA.buildbin-libdir RTCA_1.22.0.tar.gz >RTCA.Rcheck\00install.out 2>&1 && cp RTCA.Rcheck\00install.out RTCA-install.out  && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=RTCA.buildbin-libdir --install="check:RTCA-install.out" --force-multiarch --no-vignettes --timings RTCA_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'D:/biocbld/bbs-3.2-bioc/meat/RTCA.Rcheck'
* using R version 3.2.4 (2016-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RTCA/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RTCA' version '1.22.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RTCA' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in Makefiles ... OK
* checking for GNU extensions in Makefiles ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [7s] OK
** running examples for arch 'x64' ... [8s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'essentials.R' [3s]
 [4s] OK
** running tests for arch 'x64' ...
  Running 'essentials.R' [6s]
 [6s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK

RTCA.Rcheck/00install.out:


install for i386

* installing *source* package 'RTCA' ...
** R
** inst
** preparing package for lazy loading
Creating a generic function for 'time' from package 'stats' in package 'RTCA'
Creating a generic function for 'plot' from package 'graphics' in package 'RTCA'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'RTCA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RTCA' as RTCA_1.22.0.zip
* DONE (RTCA)

RTCA.Rcheck/examples_i386/RTCA-Ex.timings:

nameusersystemelapsed
RTCA-class0.220.000.22
RTCAtimeline-class000
alphaNames000
combineRTCA0.290.000.30
controlView0.250.000.25
derivativeTransform0.220.000.22
factor2numeric0.020.000.02
interpolationTransform0.540.000.54
nearestTimeIndex0.260.000.27
parseRTCA1.050.001.04
plateView0.420.000.42
plotGridEffect0.550.000.55
ratioTransform0.200.000.21
rgrTransform0.550.000.54
sliceRTCA0.270.000.27
smoothTransform0.40.00.4
spectramaxImport0.000.010.02

RTCA.Rcheck/examples_x64/RTCA-Ex.timings:

nameusersystemelapsed
RTCA-class0.320.000.33
RTCAtimeline-class000
alphaNames000
combineRTCA0.390.000.39
controlView0.500.020.52
derivativeTransform0.330.000.32
factor2numeric0.010.000.02
interpolationTransform0.720.000.72
nearestTimeIndex0.330.000.32
parseRTCA1.120.001.13
plateView0.530.000.53
plotGridEffect0.750.000.75
ratioTransform0.220.000.22
rgrTransform0.640.000.64
sliceRTCA0.280.000.28
smoothTransform0.450.000.45
spectramaxImport0.020.000.01