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This page was generated on 2024-05-16 14:51:32 -0400 (Thu, 16 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 383/430HostnameOS / ArchINSTALLBUILDCHECK
STexampleData 1.12.0  (landing page)
Lukas M. Weber
Snapshot Date: 2024-05-16 07:30:03 -0400 (Thu, 16 May 2024)
git_url: https://git.bioconductor.org/packages/STexampleData
git_branch: RELEASE_3_19
git_last_commit: c804749
git_last_commit_date: 2024-04-30 11:09:10 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for STexampleData on nebbiolo1


To the developers/maintainers of the STexampleData package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: STexampleData
Version: 1.12.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data STexampleData
StartedAt: 2024-05-16 10:53:02 -0400 (Thu, 16 May 2024)
EndedAt: 2024-05-16 10:53:42 -0400 (Thu, 16 May 2024)
EllapsedTime: 39.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data STexampleData
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* checking for file ‘STexampleData/DESCRIPTION’ ... OK
* preparing ‘STexampleData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘STexampleData_overview.Rmd’ using rmarkdown

Quitting from lines 84-95 [unnamed-chunk-3] (STexampleData_overview.Rmd)
Error: processing vignette 'STexampleData_overview.Rmd' failed with diagnostics:
"Visium_humanDLPFC" matches more than 1 ExperimentHub resource
--- failed re-building ‘STexampleData_overview.Rmd’

SUMMARY: processing the following file failed:
  ‘STexampleData_overview.Rmd’

Error: Vignette re-building failed.
Execution halted