Back to Books build report for BioC 3.19

This page was generated on 2024-05-24 14:00:04 -0400 (Fri, 24 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 9/10HostnameOS / ArchINSTALLBUILDCHECK
OSCA.workflows 1.12.0  (landing page)
Peter Hickey
Snapshot Date: 2024-05-24 06:45:01 -0400 (Fri, 24 May 2024)
git_url: https://git.bioconductor.org/packages/OSCA.workflows
git_branch: RELEASE_3_19
git_last_commit: 0c53cac
git_last_commit_date: 2024-04-30 10:23:25 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

BUILD results for OSCA.workflows on nebbiolo1


To the developers/maintainers of the OSCA.workflows package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: OSCA.workflows
Version: 1.12.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.workflows
StartedAt: 2024-05-24 07:02:21 -0400 (Fri, 24 May 2024)
EndedAt: 2024-05-24 08:07:41 -0400 (Fri, 24 May 2024)
EllapsedTime: 3920.7 seconds
RetCode: 0
Status:   OK  
PackageFile: OSCA.workflows_1.12.0.tar.gz
PackageFileSize: 15.97 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSCA.workflows
###
##############################################################################
##############################################################################


* checking for file ‘OSCA.workflows/DESCRIPTION’ ... OK
* preparing ‘OSCA.workflows’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* creating default NAMESPACE file
* building ‘OSCA.workflows_1.12.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OSCA.workflows/inst/doc/book/tenx-unfiltered-pbmc4k_files/figure-html/unref-unfiltered-pbmc-mito-1.png’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OSCA.workflows/inst/doc/book/tenx-unfiltered-pbmc4k_files/figure-html/unref-unfiltered-pbmc-norm-1.png’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OSCA.workflows/inst/doc/book/tenx-unfiltered-pbmc4k_files/figure-html/unref-unfiltered-pbmc-tsne-1.png’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OSCA.workflows/inst/doc/book/tenx-unfiltered-pbmc4k_files/figure-html/unref-unfiltered-pbmc-var-1.png’