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This page was generated on 2024-06-07 20:26 -0400 (Fri, 07 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4755
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4489
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4520
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4466
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1483/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
optimalFlow 1.16.0  (landing page)
Hristo Inouzhe
Snapshot Date: 2024-06-05 14:00:26 -0400 (Wed, 05 Jun 2024)
git_url: https://git.bioconductor.org/packages/optimalFlow
git_branch: RELEASE_3_19
git_last_commit: 2d9a6a2
git_last_commit_date: 2024-04-30 11:24:00 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64  OK    TIMEOUT  skippedskipped

BUILD results for optimalFlow on palomino3

To the developers/maintainers of the optimalFlow package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/optimalFlow.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: optimalFlow
Version: 1.16.0
Command: chmod a+r optimalFlow -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data optimalFlow
StartedAt: 2024-06-05 21:25:02 -0400 (Wed, 05 Jun 2024)
EndedAt: 2024-06-05 21:26:14 -0400 (Wed, 05 Jun 2024)
EllapsedTime: 71.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r optimalFlow -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data optimalFlow
###
##############################################################################
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* checking for file 'optimalFlow/DESCRIPTION' ... OK
* preparing 'optimalFlow':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'optimalFlow_vignette.Rmd' using rmarkdown

Quitting from lines 103-107 [ej111] (optimalFlow_vignette.Rmd)
Error: processing vignette 'optimalFlow_vignette.Rmd' failed with diagnostics:
creation of server socket failed: port 11840 cannot be opened
--- failed re-building 'optimalFlow_vignette.Rmd'

SUMMARY: processing the following file failed:
  'optimalFlow_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted