Back to Build/check report for BioC 3.18 annotations
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This page was generated on 2024-04-17 08:30:07 -0400 (Wed, 17 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4677
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 10/45HostnameOS / ArchINSTALLBUILDCHECK
alternativeSplicingEvents.hg19 1.1.0  (landing page)
Nuno Agostinho
Snapshot Date: 2024-04-17 06:00:01 -0400 (Wed, 17 Apr 2024)
git_url: https://git.bioconductor.org/packages/alternativeSplicingEvents.hg19
git_branch: RELEASE_3_18
git_last_commit: 2ec71ae
git_last_commit_date: 2021-02-09 11:24:54 -0400 (Tue, 09 Feb 2021)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

CHECK results for alternativeSplicingEvents.hg19 on nebbiolo2


To the developers/maintainers of the alternativeSplicingEvents.hg19 package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: alternativeSplicingEvents.hg19
Version: 1.1.0
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:alternativeSplicingEvents.hg19.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings alternativeSplicingEvents.hg19_1.1.0.tar.gz
StartedAt: 2024-04-17 06:33:32 -0400 (Wed, 17 Apr 2024)
EndedAt: 2024-04-17 06:33:33 -0400 (Wed, 17 Apr 2024)
EllapsedTime: 1.0 seconds
RetCode: 0
Status:   OK  
CheckDir: alternativeSplicingEvents.hg19.Rcheck
Warnings: 0

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:alternativeSplicingEvents.hg19.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings alternativeSplicingEvents.hg19_1.1.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.18-data-annotation/meat/alternativeSplicingEvents.hg19.Rcheck’
* using R version 4.3.3 (2024-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
    GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘alternativeSplicingEvents.hg19/DESCRIPTION’ ... OK
* checking extension type ... ERROR
Extensions with Type ‘Annotation package’ cannot be checked.
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.18-data-annotation/meat/alternativeSplicingEvents.hg19.Rcheck/00check.log’
for details.

Installation output

Tests output

Example timings