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This page was generated on 2024-03-28 11:32:24 -0400 (Thu, 28 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4376
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1257/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
miloR 1.10.0  (landing page)
Mike Morgan
Snapshot Date: 2024-03-26 09:00:03 -0400 (Tue, 26 Mar 2024)
git_url: https://git.bioconductor.org/packages/miloR
git_branch: RELEASE_3_18
git_last_commit: 7a29982
git_last_commit_date: 2023-10-24 11:32:53 -0400 (Tue, 24 Oct 2023)
kjohnson1macOS 13.6.1 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for miloR on kjohnson1


To the developers/maintainers of the miloR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: miloR
Version: 1.10.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data miloR
StartedAt: 2024-03-26 21:34:57 -0400 (Tue, 26 Mar 2024)
EndedAt: 2024-03-26 21:42:21 -0400 (Tue, 26 Mar 2024)
EllapsedTime: 443.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data miloR
###
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* checking for file ‘miloR/DESCRIPTION’ ... OK
* preparing ‘miloR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘milo_contrasts.Rmd’ using rmarkdown

Quitting from lines 55-61 [unnamed-chunk-3] (milo_contrasts.Rmd)
Error: processing vignette 'milo_contrasts.Rmd' failed with diagnostics:
function 'as_cholmod_sparse' not provided by package 'Matrix'
--- failed re-building ‘milo_contrasts.Rmd’

--- re-building ‘milo_demo.Rmd’ using rmarkdown

Quitting from lines 66-71 [unnamed-chunk-3] (milo_demo.Rmd)
Error: processing vignette 'milo_demo.Rmd' failed with diagnostics:
function 'as_cholmod_sparse' not provided by package 'Matrix'
--- failed re-building ‘milo_demo.Rmd’

--- re-building ‘milo_gastrulation.Rmd’ using rmarkdown
2024-03-26 21:38:57.997 R[4927:393992891] XType: Using static font registry.
Warning: ggrepel: 4 unlabeled data points (too many overlaps). Consider increasing max.overlaps
--- finished re-building ‘milo_gastrulation.Rmd’

SUMMARY: processing the following files failed:
  ‘milo_contrasts.Rmd’ ‘milo_demo.Rmd’

Error: Vignette re-building failed.
Execution halted