Back to Mac ARM64 build report for BioC 3.18 |
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This page was generated on 2024-03-28 11:32:21 -0400 (Thu, 28 Mar 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kjohnson1 | macOS 13.6.1 Ventura | arm64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4376 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 763/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Christopher Bare
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | OK | OK | WARNINGS | OK | ||||||||
To the developers/maintainers of the gaggle package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: gaggle |
Version: 1.70.0 |
Command: rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.70.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gaggle.buildbin-libdir |
StartedAt: 2024-03-28 08:10:55 -0400 (Thu, 28 Mar 2024) |
EndedAt: 2024-03-28 08:11:01 -0400 (Thu, 28 Mar 2024) |
EllapsedTime: 6.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: gaggle_1.70.0.tgz |
PackageFileSize: 303.1 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.70.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gaggle.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=gaggle.buildbin-libdir gaggle_1.70.0.tar.gz' >>>>>>> * installing *source* package ‘gaggle’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location onLoad -- libname: /Users/biocbuild/bbs-3.18-bioc-mac-arm64/meat/gaggle.buildbin-libdir/00LOCK-gaggle/00new pkgname: gaggle path to jar: /Users/biocbuild/bbs-3.18-bioc-mac-arm64/meat/gaggle.buildbin-libdir/00LOCK-gaggle/00new/gaggle/jars/gaggleRShell.jar script: gaggle.R $Revision: 4499 $ $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ os version: Mac OS X jvm version: 18.0.1.1 You are using the wrong version of Java. Please see http://gaggle.systemsbiology.org/docs/html/java Warning: Package 'gaggle' is deprecated and will be removed from Bioconductor version 3.19 ** testing if installed package can be loaded from final location onLoad -- libname: /Users/biocbuild/bbs-3.18-bioc-mac-arm64/meat/gaggle.buildbin-libdir pkgname: gaggle path to jar: /Users/biocbuild/bbs-3.18-bioc-mac-arm64/meat/gaggle.buildbin-libdir/gaggle/jars/gaggleRShell.jar script: gaggle.R $Revision: 4499 $ $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ os version: Mac OS X jvm version: 18.0.1.1 You are using the wrong version of Java. Please see http://gaggle.systemsbiology.org/docs/html/java Warning: Package 'gaggle' is deprecated and will be removed from Bioconductor version 3.19 ** testing if installed package keeps a record of temporary installation path * DONE (gaggle)