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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:BiocFileCache.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings BiocFileCache_2.10.1.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.18-bioc-mac-arm64/meat/BiocFileCache.Rcheck’
* using R version 4.3.3 (2024-02-29)
* using platform: aarch64-apple-darwin20 (64-bit)
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘BiocFileCache/DESCRIPTION’ ... OK
* this is package ‘BiocFileCache’ version ‘2.10.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘BiocFileCache’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.sql_clean_cache: no visible binding for global variable ‘rid’
.sql_clean_cache: no visible binding for global variable ‘access_time’
.sql_get_resource_table: no visible binding for global variable ‘rid’
.sql_get_resource_table: no visible binding for global variable ‘id’
Undefined global functions or variables:
  access_time id rid
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
    adding: BiocFileCacheExport/6fb6573b6be1_file6fb62f5cc5b (stored 0%)
  [ FAIL 1 | WARN 5 | SKIP 0 | PASS 254 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test_sql.R:134:5'): .sql_add_resource() changes remote special ──────
  Error in `.util_download(x, rid[i], proxy, config, "bfcadd()", ...)`: bfcadd() failed; see warnings()
  Backtrace:
      ▆
   1. ├─BiocFileCache::bfcadd(bfc, url) at test_sql.R:134:5
   2. └─BiocFileCache::bfcadd(bfc, url)
   3.   └─BiocFileCache:::.util_download(...)
  
  [ FAIL 1 | WARN 5 | SKIP 0 | PASS 254 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.18-bioc-mac-arm64/meat/BiocFileCache.Rcheck/00check.log’
for details.

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL BiocFileCache
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’
* installing *source* package ‘BiocFileCache’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BiocFileCache)

R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(BiocFileCache)
Loading required package: dbplyr
> 
> test_check("BiocFileCache")
  adding: BiocFileCacheExport/ (stored 0%)
  adding: BiocFileCacheExport/file6fb62f5cc5b (stored 0%)
  adding: BiocFileCacheExport/BiocFileCache.sqlite (deflated 96%)
  adding: BiocFileCacheExport/6fb6573b6be1_file6fb62f5cc5b (stored 0%)
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 254 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_sql.R:134:5'): .sql_add_resource() changes remote special ──────
Error in `.util_download(x, rid[i], proxy, config, "bfcadd()", ...)`: bfcadd() failed; see warnings()
Backtrace:
    ▆
 1. ├─BiocFileCache::bfcadd(bfc, url) at test_sql.R:134:5
 2. └─BiocFileCache::bfcadd(bfc, url)
 3.   └─BiocFileCache:::.util_download(...)

[ FAIL 1 | WARN 5 | SKIP 0 | PASS 254 ]
Error: Test failures
Execution halted