Back to Mac ARM64 build report for BioC 3.18 |
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This page was generated on 2024-03-28 11:32:17 -0400 (Thu, 28 Mar 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kjohnson1 | macOS 13.6.1 Ventura | arm64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4376 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 208/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Junfang Chen
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | OK | ERROR | skipped | skipped | ||||||||
To the developers/maintainers of the BioMM package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: BioMM |
Version: 1.18.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BioMM |
StartedAt: 2024-03-26 14:20:21 -0400 (Tue, 26 Mar 2024) |
EndedAt: 2024-03-26 14:22:01 -0400 (Tue, 26 Mar 2024) |
EllapsedTime: 100.3 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BioMM ### ############################################################################## ############################################################################## * checking for file ‘BioMM/DESCRIPTION’ ... OK * preparing ‘BioMM’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘BioMMtutorial.Rmd’ using rmarkdown Quitting from lines 307-314 [stage2dataViz] (BioMMtutorial.Rmd) Error: processing vignette 'BioMMtutorial.Rmd' failed with diagnostics: BiocParallel errors 4 remote errors, element index: 1, 15, 29, 43 51 unevaluated and other errors first remote error: Error in (function (..., row.names = NULL, check.rows = FALSE, check.names = TRUE, : 'row.names' should specify one of the variables --- failed re-building ‘BioMMtutorial.Rmd’ SUMMARY: processing the following file failed: ‘BioMMtutorial.Rmd’ Error: Vignette re-building failed. Execution halted