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This page was generated on 2023-01-02 09:00:47 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for rhdf5client on palomino5


To the developers/maintainers of the rhdf5client package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1654/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rhdf5client 1.21.0  (landing page)
Vincent Carey
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/rhdf5client
git_branch: master
git_last_commit: 449f381
git_last_commit_date: 2022-11-01 11:16:37 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: rhdf5client
Version: 1.21.0
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL rhdf5client
StartedAt: 2022-12-28 15:38:10 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 15:38:32 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 22.1 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL rhdf5client
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* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'rhdf5client' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c extract.c -o extract.o
extract.c: In function 'extractBin':
extract.c:101:42: warning: 'rdp' may be used uninitialized [-Wmaybe-uninitialized]
  101 |     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
      |                                          ^
extract.c:90:11: note: 'rdp' was declared here
   90 |   double *rdp;
      |           ^~~
extract.c:101:52: warning: 'rip' may be used uninitialized [-Wmaybe-uninitialized]
  101 |     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
      |                                                    ^
extract.c:89:8: note: 'rip' was declared here
   89 |   int *rip;
      |        ^~~
gcc -shared -s -static-libgcc -o rhdf5client.dll tmp.def extract.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-rhdf5client/00new/rhdf5client/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rhdf5client)