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This page was generated on 2023-01-02 09:00:29 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
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BUILD BIN results for flowPeaks on palomino5


To the developers/maintainers of the flowPeaks package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 690/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowPeaks 1.45.0  (landing page)
Yongchao Ge
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/flowPeaks
git_branch: master
git_last_commit: d9620a8
git_last_commit_date: 2022-11-01 11:07:04 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: flowPeaks
Version: 1.45.0
Command: rm -rf flowPeaks.buildbin-libdir && mkdir flowPeaks.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=flowPeaks.buildbin-libdir flowPeaks_1.45.0.tar.gz
StartedAt: 2022-12-29 05:09:40 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:10:09 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 28.9 seconds
RetCode: 0
Status:   OK  
PackageFile: flowPeaks_1.45.0.zip
PackageFileSize: 2.087 MiB

Command output

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### Running command:
###
###   rm -rf flowPeaks.buildbin-libdir && mkdir flowPeaks.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=flowPeaks.buildbin-libdir flowPeaks_1.45.0.tar.gz
###
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* installing *source* package 'flowPeaks' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
rm -f flowPeaks.dll Rpack.o Rregistrate.o VoronoiDiagramGenerator.o flowPeaks.o func_collect.o func_collect_supp.o gvector_gmatrix.o kd_tree.o kmns.o
"F:/biocbuild/bbs-3.17-bioc/R/bin/x64/Rscript.exe" "../tools/winlibs.R" 2.4
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Rpack.cpp -o Rpack.o
Rpack.cpp: In function 'void Rpack_relevel(int*, int*, int*, int*, int*, int*)':
Rpack.cpp:141:25: warning: comparison of integer expressions of different signedness: 'std::map<int, int>::size_type' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
  141 |         if(levels.size()<(i+1)){
      |            ~~~~~~~~~~~~~^~~~~~
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Rregistrate.cpp -o Rregistrate.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c VoronoiDiagramGenerator.cpp -o VoronoiDiagramGenerator.o
VoronoiDiagramGenerator.cpp: In member function 'void VoronoiDiagramGenerator::out_site(Site*)':
VoronoiDiagramGenerator.cpp:803:12: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses]
  803 |         if(!triangulate & plot & !debug)
      |            ^~~~~~~~~~~~
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c flowPeaks.cpp -o flowPeaks.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c func_collect.cpp -o func_collect.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c func_collect_supp.cpp -o func_collect_supp.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c gvector_gmatrix.cpp -o gvector_gmatrix.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c kd_tree.cpp -o kd_tree.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"  -I/src/include -I../windows/gsl-master/include/gsl   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c kmns.cpp -o kmns.o
g++ -std=gnu++11 -shared -s -static-libgcc -o flowPeaks.dll tmp.def Rpack.o Rregistrate.o VoronoiDiagramGenerator.o flowPeaks.o func_collect.o func_collect_supp.o gvector_gmatrix.o kd_tree.o kmns.o -L../windows/gsl-master/lib/x64 -lgsl -lgslcblas -lm -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/flowPeaks.buildbin-libdir/00LOCK-flowPeaks/00new/flowPeaks/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'flowPeaks' as flowPeaks_1.45.0.zip
* DONE (flowPeaks)