Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:34 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for yarn on tokay2


To the developers/maintainers of the yarn package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/yarn.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2079/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
yarn 1.20.0  (landing page)
Joseph N Paulson
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/yarn
git_branch: RELEASE_3_14
git_last_commit: b41e4ef
git_last_commit_date: 2021-10-26 12:31:28 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: yarn
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/yarn_1.20.0.tar.gz && rm -rf yarn.buildbin-libdir && mkdir yarn.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=yarn.buildbin-libdir yarn_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL yarn_1.20.0.zip && rm yarn_1.20.0.tar.gz yarn_1.20.0.zip
StartedAt: 2022-04-12 06:33:50 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:35:22 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 92.3 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/yarn_1.20.0.tar.gz && rm -rf yarn.buildbin-libdir && mkdir yarn.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=yarn.buildbin-libdir yarn_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL yarn_1.20.0.zip && rm yarn_1.20.0.tar.gz yarn_1.20.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2 2707k    2 71337    0     0   363k      0  0:00:07 --:--:--  0:00:07  362k
 45 2707k   45 1232k    0     0  1034k      0  0:00:02  0:00:01  0:00:01 1034k
100 2707k  100 2707k    0     0  1396k      0  0:00:01  0:00:01 --:--:-- 1396k

install for i386

* installing *source* package 'yarn' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'yarn'
    finding HTML links ... done
    annotateFromBiomart                     html  
    bladder                                 html  
    checkMisAnnotation                      html  
    checkTissuesToMerge                     html  
    downloadGTEx                            html  
    extractMatrix                           html  
    filterGenes                             html  
    filterLowGenes                          html  
    filterMissingGenes                      html  
    filterSamples                           html  
    normalizeTissueAware                    html  
    plotCMDS                                html  
    plotDensity                             html  
    plotHeatmap                             html  
    qsmooth                                 html  
    qstats                                  html  
    skin                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'yarn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'yarn' as yarn_1.20.0.zip
* DONE (yarn)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'yarn' successfully unpacked and MD5 sums checked