Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:34 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for wppi on tokay2


To the developers/maintainers of the wppi package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/wppi.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2067/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
wppi 1.2.0  (landing page)
Ana Galhoz
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/wppi
git_branch: RELEASE_3_14
git_last_commit: 18c6e65
git_last_commit_date: 2021-10-26 13:08:36 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: wppi
Version: 1.2.0
Command: rm -rf wppi.buildbin-libdir && mkdir wppi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wppi.buildbin-libdir wppi_1.2.0.tar.gz
StartedAt: 2022-04-13 07:20:04 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 07:20:22 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 18.2 seconds
RetCode: 0
Status:   OK  
PackageFile: wppi_1.2.0.zip
PackageFileSize: 329.9 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf wppi.buildbin-libdir && mkdir wppi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wppi.buildbin-libdir wppi_1.2.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'wppi' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
[2022-04-13 07:20:08] [INFO]    [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`.
[2022-04-13 07:20:08] [INFO]    [OmnipathR] Welcome to OmnipathR!
[2022-04-13 07:20:08] [TRACE]   [OmnipathR] Cache locked: FALSE
Note: wrong number of arguments to '/' 
** help
*** installing help indices
  converting help for package 'wppi'
    finding HTML links ... done
    common_neighbors                        html  
    count_genes                             html  
    filter_annot_with_network               html  
    functional_annot                        html  
    graph_from_op                           html  
    in_omnipath                             html  
    prioritization_genes                    html  
    process_annot                           html  
    random_walk                             html  
    score_candidate_genes_from_PPI          html  
    subgraph_op                             html  
    weighted_adj                            html  
    wppi                                    html  
    wppi_data                               html  
    wppi_go_data                            html  
    wppi_hpo_data                           html  
    wppi_omnipath_data                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
[2022-04-13 07:20:12] [INFO]    [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`.
[2022-04-13 07:20:13] [INFO]    [OmnipathR] Welcome to OmnipathR!
[2022-04-13 07:20:13] [TRACE]   [OmnipathR] Cache locked: FALSE
** testing if installed package can be loaded from final location
[2022-04-13 07:20:16] [INFO]    [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`.
[2022-04-13 07:20:16] [INFO]    [OmnipathR] Welcome to OmnipathR!
[2022-04-13 07:20:16] [TRACE]   [OmnipathR] Cache locked: FALSE
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'wppi' ...
** testing if installed package can be loaded
[2022-04-13 07:20:21] [INFO]    [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`.
[2022-04-13 07:20:21] [INFO]    [OmnipathR] Welcome to OmnipathR!
[2022-04-13 07:20:21] [TRACE]   [OmnipathR] Cache locked: FALSE
* MD5 sums
packaged installation of 'wppi' as wppi_1.2.0.zip
* DONE (wppi)