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This page was generated on 2022-04-13 12:07:30 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for treeio on tokay2


To the developers/maintainers of the treeio package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/treeio.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1995/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
treeio 1.18.1  (landing page)
Guangchuang Yu
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/treeio
git_branch: RELEASE_3_14
git_last_commit: a06b6b3
git_last_commit_date: 2021-11-12 01:50:22 -0400 (Fri, 12 Nov 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: treeio
Version: 1.18.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/treeio_1.18.1.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL treeio_1.18.1.zip && rm treeio_1.18.1.tar.gz treeio_1.18.1.zip
StartedAt: 2022-04-12 06:18:33 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:19:58 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 84.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/treeio_1.18.1.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL treeio_1.18.1.zip && rm treeio_1.18.1.tar.gz treeio_1.18.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  627k  100  627k    0     0   741k      0 --:--:-- --:--:-- --:--:--  742k

install for i386

* installing *source* package 'treeio' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'treeio'
    finding HTML links ... done
    Nnode.treedata                          html  
    as.treedata                             html  
    as.ultrametric                          html  
    beast-parser                            html  
    drop.tip-methods                        html  
    get-placements                          html  
    get.tree                                html  
    get.treetext-methods                    html  
    getNodeNum                              html  
    is.ggtree                               html  
    isTip                                   html  
    jplace-class                            html  
    label_branch_paml                       html  
    mask                                    html  
    merge_tree                              html  
    print.treedataList                      html  
    raxml2nwk                               html  
    read-jtree                              html  
    read.astral                             html  
    read.codeml                             html  
    read.codeml_mlc                         html  
    read.fasta                              html  
    read.hyphy                              html  
    read.hyphy.seq                          html  
    read.iqtree                             html  
    read.jplace                             html  
    read.mcmctree                           html  
    read.mega_tabular                       html  
    read.newick                             html  
    read.nhx                                html  
    read.paml_rst                           html  
    read.phylip                             html  
    read.phylip.seq                         html  
    read.phylip.tree                        html  
    read.phyloxml                           html  
    read.r8s                                html  
    read.raxml                              html  
    read.treeqza                            html  
    reexports                               html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/treeio.buildbin-libdir/00LOCK-treeio/00new/treeio/help/as.treedata.html
    rename_taxa                             html  
    rescale_tree                            html  
    root-method                             html  
    tree_subset                             html  
    write-jtree                             html  
    write.beast                             html  
    write.beast.newick                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'treeio' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'treeio' as treeio_1.18.1.zip
* DONE (treeio)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'treeio' successfully unpacked and MD5 sums checked