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This page was generated on 2022-04-13 12:07:21 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for sigsquared on tokay2


To the developers/maintainers of the sigsquared package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sigsquared.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1795/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sigsquared 1.26.0  (landing page)
UnJin Lee
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/sigsquared
git_branch: RELEASE_3_14
git_last_commit: 9ef5a53
git_last_commit_date: 2021-10-26 12:18:55 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: sigsquared
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/sigsquared_1.26.0.tar.gz && rm -rf sigsquared.buildbin-libdir && mkdir sigsquared.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sigsquared.buildbin-libdir sigsquared_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL sigsquared_1.26.0.zip && rm sigsquared_1.26.0.tar.gz sigsquared_1.26.0.zip
StartedAt: 2022-04-12 04:28:55 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:29:48 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 53.0 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/sigsquared_1.26.0.tar.gz && rm -rf sigsquared.buildbin-libdir && mkdir sigsquared.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sigsquared.buildbin-libdir sigsquared_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL sigsquared_1.26.0.zip && rm sigsquared_1.26.0.tar.gz sigsquared_1.26.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  150k  100  150k    0     0   664k      0 --:--:-- --:--:-- --:--:--  667k

install for i386

* installing *source* package 'sigsquared' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'ensembleCostFcn' with signature 'dataSet="ExpressionSet",geneSig="geneSignature",jpdf="solnSpace"': no definition for class "solnSpace"
in method for 'getCVCuts' with signature 'cutoffResults="solnSpace"': no definition for class "solnSpace"
in method for 'summarizeCVCuts' with signature 'cutoffResults="solnSpace"': no definition for class "solnSpace"
** help
*** installing help indices
  converting help for package 'sigsquared'
    finding HTML links ... done
    BrCa443                                 html  
    analysisPipeline                        html  
    ensembleAdjustable                      html  
    geneSignature-class                     html  
    setGeneSignature                        html  
    sigsquared                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'sigsquared' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sigsquared' as sigsquared_1.26.0.zip
* DONE (sigsquared)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'sigsquared' successfully unpacked and MD5 sums checked