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This page was generated on 2022-04-13 12:07:20 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for seq2pathway on tokay2


To the developers/maintainers of the seq2pathway package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/seq2pathway.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1761/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
seq2pathway 1.26.0  (landing page)
Arjun Kinstlick
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/seq2pathway
git_branch: RELEASE_3_14
git_last_commit: 2352a4a
git_last_commit_date: 2021-10-26 12:18:36 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: seq2pathway
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/seq2pathway_1.26.0.tar.gz && rm -rf seq2pathway.buildbin-libdir && mkdir seq2pathway.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seq2pathway.buildbin-libdir seq2pathway_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL seq2pathway_1.26.0.zip && rm seq2pathway_1.26.0.tar.gz seq2pathway_1.26.0.zip
StartedAt: 2022-04-12 05:48:43 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:50:00 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 77.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/seq2pathway_1.26.0.tar.gz && rm -rf seq2pathway.buildbin-libdir && mkdir seq2pathway.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seq2pathway.buildbin-libdir seq2pathway_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL seq2pathway_1.26.0.zip && rm seq2pathway_1.26.0.tar.gz seq2pathway_1.26.0.zip
###
##############################################################################
##############################################################################


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install for i386

* installing *source* package 'seq2pathway' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway'
** help
*** installing help indices
  converting help for package 'seq2pathway'
    finding HTML links ... done
    Chipseq_Peak_demo                       html  
    FisherTest_GO_BP_MF_CC                  html  
    FisherTest_MsigDB                       html  
    GRanges_demo                            html  
    addDescription                          html  
    dat_RNA                                 html  
    dat_chip                                html  
    gene2pathway_test                       html  
    plotTop10                               html  
    runseq2gene                             html  
    runseq2pathway                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'seq2pathway' ...
** testing if installed package can be loaded
Warning: replacing previous import 'WGCNA::cor' by 'stats::cor' when loading 'seq2pathway'
* MD5 sums
packaged installation of 'seq2pathway' as seq2pathway_1.26.0.zip
* DONE (seq2pathway)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'seq2pathway' successfully unpacked and MD5 sums checked