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This page was generated on 2022-04-13 12:07:17 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for sangerseqR on tokay2


To the developers/maintainers of the sangerseqR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sangerseqR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1692/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sangerseqR 1.30.1  (landing page)
Jonathon Hill
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/sangerseqR
git_branch: RELEASE_3_14
git_last_commit: 6f346af
git_last_commit_date: 2022-03-22 11:53:32 -0400 (Tue, 22 Mar 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: sangerseqR
Version: 1.30.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/sangerseqR_1.30.1.tar.gz && rm -rf sangerseqR.buildbin-libdir && mkdir sangerseqR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sangerseqR.buildbin-libdir sangerseqR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL sangerseqR_1.30.1.zip && rm sangerseqR_1.30.1.tar.gz sangerseqR_1.30.1.zip
StartedAt: 2022-04-12 04:48:51 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:50:25 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 93.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/sangerseqR_1.30.1.tar.gz && rm -rf sangerseqR.buildbin-libdir && mkdir sangerseqR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sangerseqR.buildbin-libdir sangerseqR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL sangerseqR_1.30.1.zip && rm sangerseqR_1.30.1.tar.gz sangerseqR_1.30.1.zip
###
##############################################################################
##############################################################################


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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 23 1206k   23  288k    0     0   851k      0  0:00:01 --:--:--  0:00:01  851k
100 1206k  100 1206k    0     0  1347k      0 --:--:-- --:--:-- --:--:-- 1348k

install for i386

* installing *source* package 'sangerseqR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'sangerseqR'
    finding HTML links ... done
    PolyPeakParser                          html  
    abif-class                              html  
    chromatogram                            html  
    makeBaseCalls                           html  
    read.abif                               html  
    read.scf                                html  
    readsangerseq                           html  
    sangerseq-class                         html  
    sangerseqAccessors                      html  
    finding level-2 HTML links ... done

    sangerseqR-package                      html  
    scf-class                               html  
    setAllelePhase                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'sangerseqR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sangerseqR' as sangerseqR_1.30.1.zip
* DONE (sangerseqR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'sangerseqR' successfully unpacked and MD5 sums checked