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This page was generated on 2022-01-14 13:06:43 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for microbiomeMarker on tokay2


To the developers/maintainers of the microbiomeMarker package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/microbiomeMarker.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1144/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
microbiomeMarker 1.0.1  (landing page)
Yang Cao
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/microbiomeMarker
git_branch: RELEASE_3_14
git_last_commit: d4852b9
git_last_commit_date: 2021-11-08 03:46:16 -0500 (Mon, 08 Nov 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: microbiomeMarker
Version: 1.0.1
Command: rm -rf microbiomeMarker.buildbin-libdir && mkdir microbiomeMarker.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microbiomeMarker.buildbin-libdir microbiomeMarker_1.0.1.tar.gz
StartedAt: 2022-01-14 06:04:03 -0500 (Fri, 14 Jan 2022)
EndedAt: 2022-01-14 06:05:16 -0500 (Fri, 14 Jan 2022)
EllapsedTime: 73.6 seconds
RetCode: 0
Status:   OK  
PackageFile: microbiomeMarker_1.0.1.zip
PackageFileSize: 2.747 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf microbiomeMarker.buildbin-libdir && mkdir microbiomeMarker.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microbiomeMarker.buildbin-libdir microbiomeMarker_1.0.1.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'microbiomeMarker' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'microbiomeMarker'
    finding HTML links ... done
    abundances-methods                      html  
    finding level-2 HTML links ... done

    aggregate_taxa                          html  
    assign-marker_table                     html  
    assign-otu_table                        html  
    data-caporaso                           html  
    data-cid_ying                           html  
    data-ecam                               html  
    data-enterotypes_arumugam               html  
    data-kostic_crc                         html  
    data-oxygen                             html  
    data-pediatric_ibd                      html  
    data-spontaneous_colitis                html  
    effect_size-plot                        html  
    extract-methods                         html  
    extract_posthoc_res                     html  
    get_treedata_phyloseq                   html  
    import_dada2                            html  
    import_qiime2                           html  
    marker_table-class                      html  
    marker_table-methods                    html  
    microbiomeMarker-class                  html  
    microbiomeMarker-package                html  
    microbiomeMarker                        html  
    nmarker-methods                         html  
    normalize-methods                       html  
    phyloseq2DESeq2                         html  
    phyloseq2edgeR                          html  
    phyloseq2metagenomeSeq                  html  
    plot_abundance                          html  
    plot_cladogram                          html  
    plot_heatmap                            html  
    plot_postHocTest                        html  
    plot_sl_roc                             html  
    postHocTest-class                       html  
    postHocTest                             html  
    reexports                               html  
    run_aldex                               html  
    run_ancom                               html  
    run_ancombc                             html  
    run_deseq2                              html  
    run_edger                               html  
    run_lefse                               html  
    run_limma_voom                          html  
    run_marker                              html  
    run_metagenomeseq                       html  
    run_posthoc_test                        html  
    run_simple_stat                         html  
    run_sl                                  html  
    run_test_multiple_groups                html  
    run_test_two_groups                     html  
    subset_marker                           html  
    summarize_taxa                          html  
    transform_abundances                    html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'microbiomeMarker' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'microbiomeMarker' as microbiomeMarker_1.0.1.zip
* DONE (microbiomeMarker)