Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-04-13 12:06:51 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for memes on tokay2


To the developers/maintainers of the memes package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/memes.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1082/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
memes 1.2.5  (landing page)
Spencer Nystrom
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/memes
git_branch: RELEASE_3_14
git_last_commit: a1d3271
git_last_commit_date: 2022-02-03 19:16:33 -0400 (Thu, 03 Feb 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: memes
Version: 1.2.5
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/memes_1.2.5.tar.gz && rm -rf memes.buildbin-libdir && mkdir memes.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=memes.buildbin-libdir memes_1.2.5.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL memes_1.2.5.zip && rm memes_1.2.5.tar.gz memes_1.2.5.zip
StartedAt: 2022-04-12 06:30:44 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:32:36 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 111.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/memes_1.2.5.tar.gz && rm -rf memes.buildbin-libdir && mkdir memes.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=memes.buildbin-libdir memes_1.2.5.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL memes_1.2.5.zip && rm memes_1.2.5.tar.gz memes_1.2.5.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2  888k    2 25439    0     0   211k      0  0:00:04 --:--:--  0:00:04  212k
100  888k  100  888k    0     0  1388k      0 --:--:-- --:--:-- --:--:-- 1388k

install for i386

* installing *source* package 'memes' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'memes'
    finding HTML links ... done
    add_sequence                            html  
    ame_compare_heatmap_methods             html  
    check_meme_install                      html  
    drop_best_match                         html  
    example_ame                             html  
    example_ame_large                       html  
    example_chip_summits                    html  
    example_dreme                           html  
    example_dreme_by_binding                html  
    example_dreme_tomtom                    html  
    example_fimo                            html  
    example_peaks                           html  
    example_rnaseq                          html  
    example_tomtom                          html  
    force_best_match                        html  
    get_sequence                            html  
    has_duplicate_motifs                    html  
    importAme                               html  
    importDremeXML                          html  
    importFimo                              html  
    importMeme                              html  
    importStremeXML                         html  
    importTomTomXML                         html  
    meme_is_installed                       html  
    memes-package                           html  
    nest_tomtom                             html  
    plot_ame_heatmap                        html  
    plot_sequence_heatmap                   html  
    remove_duplicate_motifs                 html  
    runAme                                  html  
    runDreme                                html  
    runFimo                                 html  
    runMeme                                 html  
    runStreme                               html  
    runTomTom                               html  
    update_best_match                       html  
    view_tomtom_hits                        html  
    write_fasta                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'memes' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'memes' as memes_1.2.5.zip
* DONE (memes)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'memes' successfully unpacked and MD5 sums checked