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This page was generated on 2022-04-13 12:06:45 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for intansv on tokay2


To the developers/maintainers of the intansv package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/intansv.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 938/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
intansv 1.34.0  (landing page)
Wen Yao
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/intansv
git_branch: RELEASE_3_14
git_last_commit: 499d4d8
git_last_commit_date: 2021-10-26 12:09:02 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: intansv
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/intansv_1.34.0.tar.gz && rm -rf intansv.buildbin-libdir && mkdir intansv.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=intansv.buildbin-libdir intansv_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL intansv_1.34.0.zip && rm intansv_1.34.0.tar.gz intansv_1.34.0.zip
StartedAt: 2022-04-12 07:15:16 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:16:40 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 84.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/intansv_1.34.0.tar.gz && rm -rf intansv.buildbin-libdir && mkdir intansv.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=intansv.buildbin-libdir intansv_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL intansv_1.34.0.zip && rm intansv_1.34.0.tar.gz intansv_1.34.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 45  484k   45  221k    0     0   836k      0 --:--:-- --:--:-- --:--:--  835k
100  484k  100  484k    0     0  1171k      0 --:--:-- --:--:-- --:--:-- 1172k

install for i386

* installing *source* package 'intansv' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'intansv'
    finding HTML links ... done
    methodsMerge                            html  
    plotChromosome                          html  
    plotRegion                              html  
    readBreakDancer                         html  
    readCnvnator                            html  
    readDelly                               html  
    readLumpy                               html  
    readPindel                              html  
    readSoftSearch                          html  
    readSvseq                               html  
    svAnnotation                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'intansv' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'intansv' as intansv_1.34.0.zip
* DONE (intansv)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'intansv' successfully unpacked and MD5 sums checked