Back to Multiple platform build/check report for BioC 3.14
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-01-26 13:06:39 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for ggmsa on tokay2


To the developers/maintainers of the ggmsa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ggmsa.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 777/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggmsa 1.0.0  (landing page)
Lang Zhou
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/ggmsa
git_branch: RELEASE_3_14
git_last_commit: 17e4f08
git_last_commit_date: 2021-10-26 13:12:41 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ggmsa
Version: 1.0.0
Command: rm -rf ggmsa.buildbin-libdir && mkdir ggmsa.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ggmsa.buildbin-libdir ggmsa_1.0.0.tar.gz
StartedAt: 2022-01-26 06:17:52 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 06:18:34 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 41.4 seconds
RetCode: 0
Status:   OK  
PackageFile: ggmsa_1.0.0.zip
PackageFileSize: 2.457 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf ggmsa.buildbin-libdir && mkdir ggmsa.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ggmsa.buildbin-libdir ggmsa_1.0.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'ggmsa' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Note: wrong number of arguments to 'seq_len' 
** help
*** installing help indices
  converting help for package 'ggmsa'
    finding HTML links ... done
    GVariation                              html  
    Gram-negative_AKL.fasta                 html  
    Gram-positive_AKL.fasta                 html  
    LeaderRepeat_All.fa                     html  
    Rfam                                    html  
    TP53_genes.xlsx                         html  
    available_colors                        html  
    available_fonts                         html  
    available_msa                           html  
    facet_msa                               html  
    geom_GC                                 html  
    geom_helix                              html  
    geom_msa                                html  
    geom_msaBar                             html  
    geom_seed                               html  
    geom_seqlogo                            html  
    ggSeqBundle                             html  
    gghelix                                 html  
    ggmsa                                   html  
    plot-methods                            html  
    readSSfile                              html  
    sample.fasta                            html  
    seedSample.fa                           html  
    seqdiff                                 html  
    seqlogo                                 html  
    sequence-link-tree.fasta                html  
    show-methods                            html  
    simplot                                 html  
    tidy_msa                                html  
    tp53.fa                                 html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ggmsa' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ggmsa' as ggmsa_1.0.0.zip
* DONE (ggmsa)