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This page was generated on 2022-04-13 12:05:17 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for discordant on nebbiolo2


To the developers/maintainers of the discordant package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/discordant.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 517/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
discordant 1.18.0  (landing page)
Charlotte Siska
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/discordant
git_branch: RELEASE_3_14
git_last_commit: 7872d84
git_last_commit_date: 2021-10-26 12:32:49 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: discordant
Version: 1.18.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL discordant
StartedAt: 2022-04-12 03:15:05 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 03:15:13 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 8.2 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL discordant
###
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* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘discordant’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c discordant.c -o discordant.o
discordant.c: In function ‘em_normal_partial_concordant’:
discordant.c:21:13: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
   21 |   while(flag>0 & iter<(*iteration)){
      |         ~~~~^~
discordant.c:147:13: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
  147 |   while(flag>0 & iter<(*iteration)){
      |         ~~~~^~
gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o discordant.so discordant.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-discordant/00new/discordant/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (discordant)