| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:27 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the derfinder package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/derfinder.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 490/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| derfinder 1.28.0 (landing page) Leonardo Collado-Torres
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: derfinder |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/derfinder_1.28.0.tar.gz && rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=derfinder.buildbin-libdir derfinder_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL derfinder_1.28.0.zip && rm derfinder_1.28.0.tar.gz derfinder_1.28.0.zip |
| StartedAt: 2022-04-12 06:35:02 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:38:27 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 204.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/derfinder_1.28.0.tar.gz && rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=derfinder.buildbin-libdir derfinder_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL derfinder_1.28.0.zip && rm derfinder_1.28.0.tar.gz derfinder_1.28.0.zip
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install for i386
* installing *source* package 'derfinder' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'derfinder'
finding HTML links ... done
analyzeChr html
annotateRegions html
calculatePvalues html
calculateStats html
coerceGR html
collapseFullCoverage html
coverageToExon html
createBw html
createBwSample html
define_cluster html
derfinder-deprecated html
derfinder-package html
extendedMapSeqlevels html
filterData html
findRegions html
fullCoverage html
genomeData html
genomeDataRaw html
genomeFstats html
genomeInfo html
genomeRegions html
genomicState html
getRegionCoverage html
getTotalMapped html
loadCoverage html
makeGenomicState html
makeModels html
mergeResults html
preprocessCoverage html
railMatrix html
rawFiles html
regionMatrix html
sampleDepth html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'derfinder' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'derfinder' as derfinder_1.28.0.zip
* DONE (derfinder)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'derfinder' successfully unpacked and MD5 sums checked