Joshua Campbell
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/celda |
| git_branch: RELEASE_3_14 |
| git_last_commit: fb720ad |
| git_last_commit_date: 2021-10-26 12:52:02 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:05:09 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the celda package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/celda.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 261/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| celda 1.10.0 (landing page) Joshua Campbell
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: celda |
| Version: 1.10.0 |
| Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:celda.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings celda_1.10.0.tar.gz |
| StartedAt: 2022-04-12 06:43:07 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:49:16 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 369.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: celda.Rcheck |
| Warnings: 0 |
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### Running command:
###
### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:celda.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings celda_1.10.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.14-bioc/meat/celda.Rcheck’
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘celda/DESCRIPTION’ ... OK
* this is package ‘celda’ version ‘1.10.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘celda’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 9.6Mb
sub-directories of 1Mb or more:
libs 8.1Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
geneSetEnrich 31.580 0.468 32.052
recursiveSplitCell 18.309 0.164 17.330
plotDimReduceGrid 15.418 0.104 15.521
recursiveSplitModule 10.278 0.024 10.119
decontX 8.644 0.119 8.765
plotDimReduceModule 7.980 0.036 8.018
plotDimReduceFeature 6.794 0.080 6.874
plotDimReduceCluster 6.606 0.024 6.630
sceCeldaCGGridSearch 1.216 0.000 38.396
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.14-bioc/meat/celda.Rcheck/00check.log’
for details.
celda.Rcheck/00install.out
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###
### Running command:
###
### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL celda
###
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##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘celda’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -c DecontX.cpp -o DecontX.o
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
161 | template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
163 | template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
718 | struct palign_impl<Offset,Packet4f>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
741 | struct palign_impl<Offset,Packet4i>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
764 | struct palign_impl<Offset,Packet2d>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
| ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
DecontX.cpp:20:13: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, 2>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<int, 2, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
DecontX.cpp:20:13: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<int, 2, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
DecontX.cpp:20:13: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
DecontX.cpp: In function ‘Eigen::SparseMatrix<double, 0, int> calculateNativeMatrix(const Eigen::MappedSparseMatrix<double>&, const NumericVector&, const NumericMatrix&, const NumericMatrix&, const IntegerVector&, const double&)’:
DecontX.cpp:321:10: warning: variable ‘x’ set but not used [-Wunused-but-set-variable]
321 | double x;
| ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from DecontX.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:282:8: required from ‘struct Eigen::internal::evaluator<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:683:103: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
DecontX.cpp:317:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:32: required from ‘Eigen::Index Eigen::SparseCompressedBase<Derived>::nonZeros() const [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from ‘Eigen::SparseCompressedBase<Derived>::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase<Derived>&, Eigen::Index) [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
DecontX.cpp:76:71: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:12: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:685:15: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
DecontX.cpp:317:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1243:70: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::insert(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:217:16: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::coeffRef(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar = double; Eigen::Index = long int]’
DecontX.cpp:339:34: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Array<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Array<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Array<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Array<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1243:70: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::insert(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:217:16: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::coeffRef(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar = double; Eigen::Index = long int]’
DecontX.cpp:339:34: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<int>, Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; Eigen::DenseBase<Derived>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from ‘Derived& Eigen::DenseBase<Derived>::setZero() [with Derived = Eigen::Map<Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:5: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:685:15: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
DecontX.cpp:317:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::SparseMatrix<double, 0, int>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator<Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from ‘struct Eigen::internal::evaluator<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:79:51: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Sparse2Sparse>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<typename DstXprType::Scalar, typename SrcXprType::Scalar>&) [with DstXprType = Eigen::SparseMatrix<double, 0, int>; SrcXprType = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Functor = Eigen::internal::assign_op<double, double>; typename SrcXprType::Scalar = double; typename DstXprType::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:38:16: required from ‘Derived& Eigen::SparseMatrixBase<Derived>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Derived = Eigen::SparseMatrix<double, 0, int>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1125:27: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:685:15: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’
DecontX.cpp:317:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<int, int>; Derived = Eigen::internal::redux_evaluator<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<int, int>; Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits<T>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits<T>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:36: required from ‘Eigen::Index Eigen::SparseCompressedBase<Derived>::nonZeros() const [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from ‘Eigen::SparseCompressedBase<Derived>::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase<Derived>&, Eigen::Index) [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
DecontX.cpp:76:71: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
650 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
161 | template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
163 | template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
718 | struct palign_impl<Offset,Packet4f>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
741 | struct palign_impl<Offset,Packet4i>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
764 | struct palign_impl<Offset,Packet2d>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
| ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter<Eigen::MappedSparseMatrix<double> >’
RcppExports.cpp:15:102: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, 2>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<int, 2, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter<Eigen::MappedSparseMatrix<double> >’
RcppExports.cpp:15:102: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:77:11: required from ‘class Rcpp::ConstReferenceInputParameter<Eigen::MappedSparseMatrix<double> >’
RcppExports.cpp:15:102: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
RcppExports.cpp:171:85: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:30: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
RcppExports.cpp:171:85: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
RcppExports.cpp:171:85: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >’
RcppExports.cpp:172:86: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:32: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenWrap.h:155:39: required from ‘SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant<bool, true>]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant<bool, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from ‘SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
RcppExports.cpp:71:96: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<int, int>; Derived = Eigen::internal::redux_evaluator<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<int, int>; Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits<T>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits<T>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:36: required from ‘Eigen::Index Eigen::SparseCompressedBase<Derived>::nonZeros() const [with Derived = Eigen::SparseMatrix<double, 0, int>; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenWrap.h:125:26: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenWrap.h:155:39: required from ‘SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant<bool, true>]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant<bool, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from ‘SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix<double, 0, int>; SEXP = SEXPREC*]’
RcppExports.cpp:71:96: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
650 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -c cG_calcGibbsProbY.cpp -o cG_calcGibbsProbY.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -c eigenMatMultInt.cpp -o eigenMatMultInt.o
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
161 | template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
163 | template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
718 | struct palign_impl<Offset,Packet4f>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
741 | struct palign_impl<Offset,Packet4i>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
764 | struct palign_impl<Offset,Packet2d>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
| ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
eigenMatMultInt.cpp:11:95: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:30: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
eigenMatMultInt.cpp:11:95: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
eigenMatMultInt.cpp:11:95: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >’
eigenMatMultInt.cpp:11:95: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
eigenMatMultInt.cpp:12:35: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from ‘struct Eigen::internal::cast_return_type<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from ‘struct Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >::CastXpr<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of ‘template<class NewType> typename Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >::CastXpr<NewType>::Type Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >::cast<NewType>() const [with NewType = double]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0, 8>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0, 8>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
eigenMatMultInt.cpp:24:39: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1, 8>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, 8>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:24:39: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Matrix<double, -1, -1>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:496,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:110:49: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
391 | typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
| ^~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
392 | typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
| ^~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
393 | typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
| ^~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs<Scalar, Index, DataMapper, nr, 0, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; int nr = 4; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:104:15: required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1981 | PacketBlock<Packet,(PacketSize%4)==0?4:PacketSize> kernel;
| ^~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs<Scalar, Index, DataMapper, Pack1, Pack2, 1, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:115:15: required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1847 | PacketBlock<Packet> kernel;
| ^~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar = double]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:133:13: required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Matrix<double, -1, -1>; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 1, false, double, 0, false, 0, 1>, Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Matrix<double, -1, -1>, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:21: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1537 | const int SResPacketHalfSize = unpacket_traits<typename unpacket_traits<SResPacket>::half>::size;
| ^~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1592 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SResPacket>::half,SResPacket>::type SResPacketHalf;
| ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1593 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SLhsPacket>::type SLhsPacketHalf;
| ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1594 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SRhsPacket>::type SRhsPacketHalf;
| ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
1595 | typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SAccPacket>::half,SAccPacket>::type SAccPacketHalf;
| ^~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true>, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true>, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true, true>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:40: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:72: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true, true>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:24:39: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:72: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:24:39: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:445,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:269:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
960 | enum {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:24:39: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from eigenMatMultInt.cpp:3:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Matrix<double, -1, -1>, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:76: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: required from ‘void Eigen::internal::generic_dense_assignment_kernel<DstEvaluatorTypeT, SrcEvaluatorTypeT, Functor, Version>::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Matrix<double, -1, -1> >; SrcEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 1> >; Functor = Eigen::internal::assign_op<double, double>; int Version = 0; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:5: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_cast_op<int, double>, const Eigen::Map<Eigen::Matrix<int, -1, -1>, 0, Eigen::Stride<0, 0> > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:12:54: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
650 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 1, -1, true> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:76: required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5: required from ‘void Eigen::internal::generic_dense_assignment_kernel<DstEvaluatorTypeT, SrcEvaluatorTypeT, Functor, Version>::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Matrix<double, -1, -1> >; SrcEvaluatorTypeT = Eigen::internal::evaluator<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1> >; Functor = Eigen::internal::assign_op<double, double>; int Version = 0; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:5: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7: required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
eigenMatMultInt.cpp:24:39: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -c matrixNorm.cpp -o matrixNorm.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fpic -g -O2 -Wall -c matrixSums.c -o matrixSums.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fopenmp -fpic -g -O2 -Wall -c matrixSumsSparse.cpp -o matrixSumsSparse.o
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
161 | template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
163 | template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
718 | struct palign_impl<Offset,Packet4f>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
741 | struct palign_impl<Offset,Packet4i>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
764 | struct palign_impl<Offset,Packet2d>
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
| ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
15 | template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
22 | template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
| ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
matrixSumsSparse.cpp:15:13: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, 2>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<int, 2, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
matrixSumsSparse.cpp:15:13: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from matrixSumsSparse.cpp:1:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<int, 2, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<int, 2, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<int, 2, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix<double>’
matrixSumsSparse.cpp:15:13: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:32: required from ‘Eigen::Index Eigen::SparseCompressedBase<Derived>::nonZeros() const [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from ‘Eigen::SparseCompressedBase<Derived>::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase<Derived>&, Eigen::Index) [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
matrixSumsSparse.cpp:31:71: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<int, int>; Derived = Eigen::internal::redux_evaluator<Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<int, int>; Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits<T>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Map<const Eigen::Matrix<int, -1, 1>, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits<T>::Scalar = int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:36: required from ‘Eigen::Index Eigen::SparseCompressedBase<Derived>::nonZeros() const [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from ‘Eigen::SparseCompressedBase<Derived>::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase<Derived>&, Eigen::Index) [with Derived = Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’
matrixSumsSparse.cpp:31:71: required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
650 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fpic -g -O2 -Wall -c perplexity.c -o perplexity.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o celda.so DecontX.o RcppExports.o cG_calcGibbsProbY.o eigenMatMultInt.o matrixNorm.o matrixSums.o matrixSumsSparse.o perplexity.o -fopenmp -L/home/biocbuild/bbs-3.14-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.14-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-celda/00new/celda/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
in method for ‘celdaClusters’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaClusters<-’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaModules’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaModules<-’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘sampleLabel’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘sampleLabel<-’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘runParams’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘resList’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaModel’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaGridSearch’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘subsetCeldaList’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘selectBestModel’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaProbabilityMap’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaUmap’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celda_C’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celda_CG’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celda_G’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaHeatmap’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘celdaTsne’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘clusterProbability’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘decontX’ with signature ‘"SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘decontXcounts’ with signature ‘"SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘decontXcounts<-’ with signature ‘"SingleCellExperiment","ANY"’: no definition for class “SingleCellExperiment”
in method for ‘factorizeMatrix’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘featureModuleLookup’ with signature ‘sce="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘geneSetEnrich’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘logLikelihood’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘logLikelihoodHistory’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘bestLogLikelihood’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘moduleHeatmap’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘perplexity’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘resamplePerplexity’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotGridSearchPerplexity’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotRPC’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotDimReduceGrid’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotDimReduceFeature’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotDimReduceModule’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotDimReduceCluster’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘plotCeldaViolin’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘recursiveSplitCell’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘recursiveSplitModule’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘reorderCelda’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘selectFeatures’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘splitModule’ with signature ‘x="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (celda)
celda.Rcheck/tests/testthat.Rout
R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> Sys.unsetenv("R_TESTS")
> library(testthat)
> test_check("celda")
Loading required package: celda
[ FAIL 0 | WARN 0 | SKIP 2 | PASS 101 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• empty test (2)
[ FAIL 0 | WARN 0 | SKIP 2 | PASS 101 ]
>
> proc.time()
user system elapsed
82.291 1.634 86.766
celda.Rcheck/celda-Ex.timings
| name | user | system | elapsed | |
| appendCeldaList | 0.002 | 0.003 | 0.007 | |
| bestLogLikelihood | 4.308 | 0.212 | 4.521 | |
| celda | 0.001 | 0.000 | 0.002 | |
| celdaClusters | 0.121 | 0.012 | 0.133 | |
| celdaGridSearch | 0 | 0 | 0 | |
| celdaHeatmap | 0.823 | 0.076 | 0.900 | |
| celdaModel | 0.111 | 0.000 | 0.111 | |
| celdaModules | 0.082 | 0.000 | 0.083 | |
| celdaPerplexity-celdaList-method | 0.002 | 0.000 | 0.002 | |
| celdaPerplexity | 0.002 | 0.000 | 0.002 | |
| celdaProbabilityMap | 2.807 | 0.104 | 2.911 | |
| celdaTsne | 2.867 | 0.019 | 2.887 | |
| celdaUmap | 3.977 | 0.134 | 4.097 | |
| celda_C | 0.81 | 0.02 | 0.83 | |
| celda_CG | 4.517 | 0.068 | 4.585 | |
| celda_G | 3.876 | 0.072 | 3.947 | |
| celdatosce | 2.018 | 0.020 | 2.038 | |
| clusterProbability | 0.471 | 0.004 | 0.475 | |
| compareCountMatrix | 0.008 | 0.000 | 0.008 | |
| countChecksum-celdaList-method | 0.002 | 0.000 | 0.002 | |
| countChecksum | 0.002 | 0.000 | 0.002 | |
| decontX | 8.644 | 0.119 | 8.765 | |
| distinctColors | 0.000 | 0.001 | 0.000 | |
| factorizeMatrix | 0.388 | 0.002 | 0.391 | |
| featureModuleLookup | 0.294 | 0.004 | 0.298 | |
| featureModuleTable | 0.413 | 0.000 | 0.413 | |
| geneSetEnrich | 31.580 | 0.468 | 32.052 | |
| logLikelihood | 0.947 | 0.000 | 0.947 | |
| logLikelihoodHistory | 0.073 | 0.004 | 0.077 | |
| matrixNames | 0.000 | 0.002 | 0.003 | |
| moduleHeatmap | 4.090 | 0.033 | 4.024 | |
| normalizeCounts | 0.003 | 0.000 | 0.003 | |
| params | 0.001 | 0.000 | 0.001 | |
| perplexity | 0.720 | 0.000 | 0.702 | |
| plotCeldaViolin | 0.707 | 0.004 | 0.709 | |
| plotDimReduceCluster | 6.606 | 0.024 | 6.630 | |
| plotDimReduceFeature | 6.794 | 0.080 | 6.874 | |
| plotDimReduceGrid | 15.418 | 0.104 | 15.521 | |
| plotDimReduceModule | 7.980 | 0.036 | 8.018 | |
| plotGridSearchPerplexity | 2.788 | 0.080 | 2.382 | |
| plotHeatmap | 0.101 | 0.008 | 0.109 | |
| plotRPC | 1.679 | 0.020 | 1.215 | |
| recodeClusterY | 0.407 | 0.004 | 0.411 | |
| recodeClusterZ | 0.362 | 0.000 | 0.362 | |
| recursiveSplitCell | 18.309 | 0.164 | 17.330 | |
| recursiveSplitModule | 10.278 | 0.024 | 10.119 | |
| reorderCelda | 2.788 | 0.008 | 2.796 | |
| reportceldaCG | 0.001 | 0.000 | 0.001 | |
| resList | 0.08 | 0.00 | 0.08 | |
| resamplePerplexity | 1.736 | 0.020 | 1.275 | |
| retrieveFeatureIndex | 0.003 | 0.000 | 0.003 | |
| runParams | 0.079 | 0.000 | 0.078 | |
| sampleLabel | 0.078 | 0.000 | 0.077 | |
| sceCeldaC | 0.788 | 0.000 | 0.754 | |
| sceCeldaCG | 4.149 | 0.004 | 3.947 | |
| sceCeldaCGGridSearch | 1.216 | 0.000 | 38.396 | |
| sceCeldaG | 1.068 | 0.000 | 1.069 | |
| selectBestModel | 0.260 | 0.004 | 0.264 | |
| selectFeatures | 0.507 | 0.004 | 0.511 | |
| simulateCells | 0.412 | 0.000 | 0.413 | |
| simulateContamination | 0.011 | 0.000 | 0.012 | |
| splitModule | 0.329 | 0.000 | 0.329 | |
| subsetCeldaList | 0.584 | 0.000 | 0.584 | |
| topRank | 0.001 | 0.000 | 0.002 | |