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This page was generated on 2022-01-17 13:05:56 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for beadarraySNP on tokay2


To the developers/maintainers of the beadarraySNP package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/beadarraySNP.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 134/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
beadarraySNP 1.60.0  (landing page)
Jan Oosting
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/beadarraySNP
git_branch: RELEASE_3_14
git_last_commit: baf3162
git_last_commit_date: 2021-10-26 11:50:17 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: beadarraySNP
Version: 1.60.0
Command: rm -rf beadarraySNP.buildbin-libdir && mkdir beadarraySNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=beadarraySNP.buildbin-libdir beadarraySNP_1.60.0.tar.gz
StartedAt: 2022-01-17 06:33:08 -0500 (Mon, 17 Jan 2022)
EndedAt: 2022-01-17 06:33:41 -0500 (Mon, 17 Jan 2022)
EllapsedTime: 32.1 seconds
RetCode: 0
Status:   OK  
PackageFile: beadarraySNP_1.60.0.zip
PackageFileSize: 1.051 MiB

Command output

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###
### Running command:
###
###   rm -rf beadarraySNP.buildbin-libdir && mkdir beadarraySNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=beadarraySNP.buildbin-libdir beadarraySNP_1.60.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'beadarraySNP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'beadarraySNP'
    finding HTML links ... done
    BeadstudioQC                            html  
    CopynumberConversion                    html  
    Datasets                                html  
    GenomicReports                          html  
    GetBeadStudioSampleNames                html  
    PolarTransforms                         html  
    QCIllumina-class                        html  
    Sample_Map2Samplesheet                  html  
    SnpSetSegments-class                    html  
    finding level-2 HTML links ... done

    alterCN                                 html  
    arrayType                               html  
    backgroundCorrect.SNP                   html  
    backgroundEstimate                      html  
    calculateLOH                            html  
    calculateQCarray                        html  
    class.SnpSetIllumina                    html  
    compareGenotypes                        html  
    createCNSummary                         html  
    dist.GT                                 html  
    getDNAindex                             html  
    heterozygosity                          html  
    heterozygousSNPs                        html  
    interactiveCNselect                     html  
    normalizeBetweenAlleles.SNP             html  
    normalizeBetweenSubsamples.SNP          html  
    normalizeLoci.SNP                       html  
    normalizeWithinArrays.SNP               html  
    pdfChromosomesSmoothCopyNumber          html  
    pdfQC                                   html  
    plotGoldenGate4OPA                      html  
    plotQC                                  html  
    read.SnpSetIllumina                     html  
    removeLowQualityProbes                  html  
    removeLowQualitySamples                 html  
    renameOPA                               html  
    reportGenotypeSegmentation              html  
    reportSamplePanelQC-methods             html  
    segmentate                              html  
    setRealCN                               html  
    smoothed.intensity                      html  
    standardNormalization                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'beadarraySNP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'beadarraySNP' as beadarraySNP_1.60.0.zip
* DONE (beadarraySNP)