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This page was generated on 2022-01-26 13:06:14 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for beachmat on tokay2


To the developers/maintainers of the beachmat package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/beachmat.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 132/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
beachmat 2.10.0  (landing page)
Aaron Lun
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/beachmat
git_branch: RELEASE_3_14
git_last_commit: b7cc532
git_last_commit_date: 2021-10-26 12:36:32 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: beachmat
Version: 2.10.0
Command: rm -rf beachmat.buildbin-libdir && mkdir beachmat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=beachmat.buildbin-libdir beachmat_2.10.0.tar.gz
StartedAt: 2022-01-26 05:33:34 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 05:34:23 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 49.0 seconds
RetCode: 0
Status:   OK  
PackageFile: beachmat_2.10.0.zip
PackageFileSize: 1.927 MiB

Command output

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###
### Running command:
###
###   rm -rf beachmat.buildbin-libdir && mkdir beachmat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=beachmat.buildbin-libdir beachmat_2.10.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'beachmat' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c fragment_sparse_rows.cpp -o fragment_sparse_rows.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o beachmat.dll tmp.def RcppExports.o fragment_sparse_rows.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/beachmat.buildbin-libdir/00LOCK-beachmat/00new/beachmat/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'beachmat'
    finding HTML links ... done
    colBlockApply                           html  
    finding level-2 HTML links ... done

    realizeFileBackedMatrix                 html  
    toCsparse                               html  
    whichNonZero                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'beachmat' ...
** libs
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c fragment_sparse_rows.cpp -o fragment_sparse_rows.o
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o beachmat.dll tmp.def RcppExports.o fragment_sparse_rows.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/beachmat.buildbin-libdir/beachmat/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'beachmat' as beachmat_2.10.0.zip
* DONE (beachmat)