| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:34 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the XCIR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/XCIR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 2069/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| XCIR 1.8.0 (landing page) Renan Sauteraud
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: XCIR |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/XCIR_1.8.0.tar.gz && rm -rf XCIR.buildbin-libdir && mkdir XCIR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XCIR.buildbin-libdir XCIR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL XCIR_1.8.0.zip && rm XCIR_1.8.0.tar.gz XCIR_1.8.0.zip |
| StartedAt: 2022-04-12 07:21:49 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:23:17 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 87.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/XCIR_1.8.0.tar.gz && rm -rf XCIR.buildbin-libdir && mkdir XCIR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XCIR.buildbin-libdir XCIR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL XCIR_1.8.0.zip && rm XCIR_1.8.0.tar.gz XCIR_1.8.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
27 1969k 27 544k 0 0 969k 0 0:00:02 --:--:-- 0:00:02 970k
100 1969k 100 1969k 0 0 1432k 0 0:00:01 0:00:01 --:--:-- 1433k
install for i386
* installing *source* package 'XCIR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'XCIR'
finding HTML links ... done
BetaConversion html
XCIR-package html
addAnno html
annotateX html
annotates_snps html
betaBinomXI html
consensusXCI html
getGenicDP html
getXCIstate html
mart_genes html
plotQC html
readRNASNPs html
readVCF4 html
readXCI html
readXVcf html
sample_clean html
xci_calls html
xci_qc html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'XCIR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'XCIR' as XCIR_1.8.0.zip
* DONE (XCIR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'XCIR' successfully unpacked and MD5 sums checked