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This page was generated on 2022-04-13 12:07:29 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for TileDBArray on tokay2


To the developers/maintainers of the TileDBArray package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TileDBArray.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1954/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TileDBArray 1.4.0  (landing page)
Aaron Lun
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/TileDBArray
git_branch: RELEASE_3_14
git_last_commit: fa2ccec
git_last_commit_date: 2021-10-26 13:02:51 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: TileDBArray
Version: 1.4.0
Command: rm -rf TileDBArray.buildbin-libdir && mkdir TileDBArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TileDBArray.buildbin-libdir TileDBArray_1.4.0.tar.gz
StartedAt: 2022-04-13 07:15:43 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 07:16:39 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 56.0 seconds
RetCode: 0
Status:   OK  
PackageFile: TileDBArray_1.4.0.zip
PackageFileSize: 1.371 MiB

Command output

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###
### Running command:
###
###   rm -rf TileDBArray.buildbin-libdir && mkdir TileDBArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TileDBArray.buildbin-libdir TileDBArray_1.4.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'TileDBArray' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c remap_indices.cpp -o remap_indices.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o TileDBArray.dll tmp.def RcppExports.o remap_indices.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/TileDBArray.buildbin-libdir/00LOCK-TileDBArray/00new/TileDBArray/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --cflags' had status 1
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --libs' had status 1
** help
*** installing help indices
  converting help for package 'TileDBArray'
    finding HTML links ... done
    TileDBArray-globals                     html  
    finding level-2 HTML links ... done

    TileDBArray-pkg                         html  
    TileDBArray                             html  
    TileDBRealizationSink                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --cflags' had status 1
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --libs' had status 1
** testing if installed package can be loaded from final location
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --cflags' had status 1
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --libs' had status 1
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TileDBArray' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c remap_indices.cpp -o remap_indices.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o TileDBArray.dll tmp.def RcppExports.o remap_indices.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/TileDBArray.buildbin-libdir/TileDBArray/libs/x64
** testing if installed package can be loaded
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--cflags"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --cflags' had status 1
Package tiledb was not found in the pkg-config search path.
Perhaps you should add the directory containing `tiledb.pc'
to the PKG_CONFIG_PATH environment variable
No package 'tiledb' found
Warning in system2(pkgcfg, c("tiledb", "--libs"), stdout = TRUE) :
  running command '"c:\rtools40\mingw32\bin\PKG-CO~1.EXE" tiledb --libs' had status 1
* MD5 sums
packaged installation of 'TileDBArray' as TileDBArray_1.4.0.zip
* DONE (TileDBArray)