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This page was generated on 2022-01-17 13:07:09 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for TNBC.CMS on tokay2


To the developers/maintainers of the TNBC.CMS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TNBC.CMS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1967/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TNBC.CMS 1.10.0  (landing page)
Doyeong Yu
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/TNBC.CMS
git_branch: RELEASE_3_14
git_last_commit: dd4cd1f
git_last_commit_date: 2021-10-26 12:50:35 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: TNBC.CMS
Version: 1.10.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TNBC.CMS_1.10.0.tar.gz && rm -rf TNBC.CMS.buildbin-libdir && mkdir TNBC.CMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TNBC.CMS.buildbin-libdir TNBC.CMS_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TNBC.CMS_1.10.0.zip && rm TNBC.CMS_1.10.0.tar.gz TNBC.CMS_1.10.0.zip
StartedAt: 2022-01-16 07:37:18 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 07:38:47 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 89.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TNBC.CMS_1.10.0.tar.gz && rm -rf TNBC.CMS.buildbin-libdir && mkdir TNBC.CMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TNBC.CMS.buildbin-libdir TNBC.CMS_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TNBC.CMS_1.10.0.zip && rm TNBC.CMS_1.10.0.tar.gz TNBC.CMS_1.10.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 12 2726k   12  342k    0     0  1866k      0  0:00:01 --:--:--  0:00:01 1863k
100 2726k  100 2726k    0     0  7986k      0 --:--:-- --:--:-- --:--:-- 7994k

install for i386

* installing *source* package 'TNBC.CMS' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TNBC.CMS'
    finding HTML links ... done
    GSE25055                                html  
    computeDS                               html  
    computeESTIMATEscore                    html  
    computeGES                              html  
    computexCellScore                       html  
    performGSVA                             html  
    plotHR                                  html  
    plotKM                                  html  
    predictCMS                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TNBC.CMS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TNBC.CMS' as TNBC.CMS_1.10.0.zip
* DONE (TNBC.CMS)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TNBC.CMS' successfully unpacked and MD5 sums checked